Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8p21
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 68 1e-12
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 58 7e-10
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 58 1e-09
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 54 1e-08
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 52 4e-08
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 51 1e-07
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 51 1e-07
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 36 0.003
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 31 0.15
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 28 0.82
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 26 3.3
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 26 4.4
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 26 4.4
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 5.8
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 67.7 bits (158), Expect = 1e-12
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +1
Query: 244 TVQVALRIRPLMQQETERGCDECIDVIPGEQ-QVQIKDLA--FTYNYVFAQHITQREFYD 414
+++V RIRP Q E + G + I + ++ D + F ++ VF TQ + +
Sbjct: 3 SIKVVCRIRPTNQLEQDLGGNNVIYPLNDSTVHIETSDYSGNFVFDRVFHPSSTQNDIFS 62
Query: 415 TAVKGLIGKLFQGYNVTILAYGQTGSGKTYTMGTNYSGSDGDFTKLGV 558
+++ + LF GYN T+LAYGQTGSGKTYTM G + +F K G+
Sbjct: 63 YSIESTVDDLFLGYNGTVLAYGQTGSGKTYTM----MGIENNFEKEGM 106
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 58.4 bits (135), Expect = 7e-10
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 361 FTYNYVFAQHITQREFYDTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTMGTNYSGSDG 537
+ ++ VF Q ++ +V ++ ++ GYN TI AYGQTG+GKTYTM + S SDG
Sbjct: 120 YAFDKVFGPEADQLMLFENSVAPMLEQVLNGYNCTIFAYGQTGTGKTYTMSGDLSDSDG 178
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 57.6 bits (133), Expect = 1e-09
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 283 QETERGCDECIDVIPGEQQVQ--IKDLAFTYNYVFAQHITQREFYDTAVKGLIGKLFQGY 456
Q +E E + PG IK AF ++ VF+ T + ++ + LI GY
Sbjct: 497 QNSEASTIEIVAQAPGSSLTGNGIKQYAFNFDRVFSPETTNEDVFNE-LSQLIQSAMDGY 555
Query: 457 NVTILAYGQTGSGKTYTMGTN 519
NV I AYGQTGSGKT+TM +N
Sbjct: 556 NVCIFAYGQTGSGKTHTMSSN 576
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 54.0 bits (124), Expect = 1e-08
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +1
Query: 349 KDLAFTYNYVFAQHITQREFYDTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTM 510
+DL + ++ VF + TQ++ Y+ + L+ + G+N TI AYG TG GKT+T+
Sbjct: 101 RDLRYAFDRVFDETATQQQVYERTARPLLDNILDGFNATIFAYGATGCGKTHTI 154
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 52.4 bits (120), Expect = 4e-08
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +1
Query: 343 QIKDLAFTYNYVFAQHITQREFYDTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTM 510
+ +D+ + ++ +F + +Q + Y + L+ + QGYN T+ AYG TG GKT+T+
Sbjct: 89 RFRDVRYAFDRLFGEEASQEDVYKGTTEPLLDSVLQGYNATVFAYGATGCGKTHTI 144
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 50.8 bits (116), Expect = 1e-07
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +1
Query: 349 KDLAFTYNYVFAQHITQREFYDTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTMGT 516
++ F+++ VFA ++ + LI GYNV+I AYGQTGSGKTYTM +
Sbjct: 533 RNYEFSFDRVFAPESDNSSVFEE-ISQLIQSAIDGYNVSIFAYGQTGSGKTYTMSS 587
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 50.8 bits (116), Expect = 1e-07
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 361 FTYNYVFAQHITQREFYDTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTM 510
+ +N VF + Y +VK ++ +F GYN + AYG TG+GKTY+M
Sbjct: 179 YLFNNVFGMESKNYDIYKRSVKSVVRNVFSGYNGIVFAYGMTGTGKTYSM 228
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 36.3 bits (80), Expect = 0.003
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 397 QREFYDTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTM 510
Q + Y++ L+ + +G+N + YGQ G+GKTY++
Sbjct: 80 QEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKTYSV 117
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 364 TYNYVFAQHITQREFYDTAVKGLIGKLFQGYNVTIL-AYGQTGSGKTYTM 510
++ VF TQ + + T LI N T+L G +G+GKTYT+
Sbjct: 55 SFTKVFPPSCTQLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTL 104
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 28.3 bits (60), Expect = 0.82
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 327 RYHVNALIAASFGLLLHQRSDAQRYLNSVYCFIFNH 220
RY+ +A ++ L+LH++ + +V C + NH
Sbjct: 670 RYNASAALSFKLSLMLHEKEEVLLLKTNVSCVLANH 705
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 27.9 bits (59), Expect = 1.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 448 QGYNVTILAYGQTGSGKTYTMGT 516
QG+N +L G++GSGK+ + T
Sbjct: 92 QGFNFNVLVLGESGSGKSTLVNT 114
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 3.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +1
Query: 208 KSMKMVEDKTIDTVQVALRIRPLMQQETERGC------DECIDVIPGE 333
K K +ED+ ++ Q LR PL+ Q+ C +C++ IP E
Sbjct: 588 KPGKRLEDEVVNQQQAMLRNLPLLLQKYRESCVSSYFFIKCVEQIPDE 635
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 412 DTAVKGLIGKLFQGYNVTILAYGQTGSGKTYTMGTNYSGSD 534
D G G LF+ N+ YGQ+G+G + G G++
Sbjct: 74 DAVKSGKFGNLFRPDNII---YGQSGAGNIWAKGHYTEGAE 111
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 420 SSVIKFSLSDMLREYVIVCKS*VFYLHLLLP 328
+S++ S+ +L+E + + S +FY +LLP
Sbjct: 302 TSIVTLSVCGILKEIITIIASTLFYHDILLP 332
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 330 PRYHVNALIAASFGLLLHQRSDAQRYLNSVYCFIFNH 220
P YH + A+ G + + +DA+ + +YC I H
Sbjct: 135 PDYHCEPSVMAASGFVYNPTADAKDAAHCLYCDINLH 171
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,339,845
Number of Sequences: 5004
Number of extensions: 47761
Number of successful extensions: 117
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -