Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p21
         (563 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   8.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.6  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 338 CCSPGITSMHSSQPLSVSCC 279
           CC     S ++ +P+  SCC
Sbjct: 145 CCGVHSLSDYNDKPIPASCC 164


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 138 YPTTKFRNG 164
           YPT +FRNG
Sbjct: 295 YPTMRFRNG 303


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 496 CLTLFGHMPVLL 461
           CLTLFG++ V+L
Sbjct: 198 CLTLFGNVLVIL 209


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 138 YPTTKFRNG 164
           YPT +FRNG
Sbjct: 295 YPTMRFRNG 303


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 466 ILAYGQTGSGKT 501
           ++A  QTGSGKT
Sbjct: 236 LMACAQTGSGKT 247


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = -2

Query: 358 LSLLFALVAPQVSRQCTHRSLFRSPVASKV*CAA-----LPEQCLLFYLQ 224
           L L+ A + P    Q  +  L   P+A+K          LPE CLLF ++
Sbjct: 87  LQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNIFLPEDCLLFTIE 136


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = -2

Query: 358 LSLLFALVAPQVSRQCTHRSLFRSPVASKV*CAA-----LPEQCLLFYLQ 224
           L L+ A + P    Q  +  L   P+A+K          LPE CLLF ++
Sbjct: 102 LQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNIFLPEDCLLFTIE 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,520
Number of Sequences: 438
Number of extensions: 3379
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)