Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p17
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          30   0.018
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 29.9 bits (64), Expect = 0.018
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 522 YYEKEALREKGDTGVSCHVERFITKYSQNN 611
           YYE + +   G  G+ C+++R +   SQNN
Sbjct: 778 YYEAKQVYRIGSNGLQCYIDRNVVFSSQNN 807


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 110 IEKLIYIRIVCSVKFMV*NRTSGQTKCL*SSWRLDQP 220
           + KL+ I    S  FMV + ++G   C  +SW + +P
Sbjct: 1   MSKLLAILAFASA-FMVLSASAGNVVCYFASWTIYRP 36


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 110 IEKLIYIRIVCSVKFMV*NRTSGQTKCL*SSWRLDQP 220
           + KL+ I    S  FMV + ++G   C  +SW + +P
Sbjct: 1   MSKLLAILAFASA-FMVLSASAGNVVCYFASWTIYRP 36


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 493 LVTLFFQFPVKNINKF 446
           +VT+FF F  K + +F
Sbjct: 67  IVTIFFNFATKKLEQF 82


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 285 EPRCGKYVRF*HVESSSLTH 344
           +PR   +VRF H+++   T+
Sbjct: 465 QPRGSVFVRFTHLQNQDFTY 484


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,358
Number of Sequences: 336
Number of extensions: 2464
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)