Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p13
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.7  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 78  CILMLVGINYFLLAEVVPXSIAPF 149
           C+L LV   Y+LL EV      PF
Sbjct: 278 CLLHLVVTPYYLLIEVCNAGYLPF 301


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 15  YSFNIENEHKMGSLRVYFCDICILMLVGINYFLLAEVV 128
           Y+F I   H +  L +Y+  + +  L+ I YF  A ++
Sbjct: 118 YAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII 155


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 270 NTCKILCNALATATKAKGPEILCSR 344
           +TC +LC +     +  GP  L SR
Sbjct: 80  STCSMLCGSTQLWPQPTGPVTLASR 104


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 381 YKTCDKPWSYANMTAEAPLC 440
           + +CDK W   N  AE   C
Sbjct: 35  HTSCDKYWKCDNNVAELKTC 54


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 381 YKTCDKPWSYANMTAEAPLC 440
           + +CDK W   N  AE   C
Sbjct: 35  HTSCDKYWKCDNNVAELKTC 54


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = -1

Query: 479 YHRRTNFHLGIFAAKWGFGSH 417
           YH   N++  + +  +G+G++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNY 84


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = -1

Query: 479 YHRRTNFHLGIFAAKWGFGSH 417
           YH   N++  + +  +G+G++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNY 84


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = -1

Query: 479 YHRRTNFHLGIFAAKWGFGSH 417
           YH   N++  + +  +G+G++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNY 84


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/21 (23%), Positives = 13/21 (61%)
 Frame = -1

Query: 479 YHRRTNFHLGIFAAKWGFGSH 417
           YH   N++  + +  +G+G++
Sbjct: 64  YHNHQNYNSNVLSNGYGYGNY 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,138
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)