Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p11
         (283 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68220-3|CAA92488.1|  144|Caenorhabditis elegans Hypothetical pr...    50   3e-07
Z75553-3|CAA99948.1|  407|Caenorhabditis elegans Hypothetical pr...    27   2.1  
Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical pr...    26   3.6  
AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical...    26   3.6  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    26   4.8  
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical...    25   6.3  
AF077532-1|AAC26268.1|  301|Caenorhabditis elegans Hypothetical ...    25   6.3  

>Z68220-3|CAA92488.1|  144|Caenorhabditis elegans Hypothetical
           protein T20D3.6 protein.
          Length = 144

 Score = 49.6 bits (113), Expect = 3e-07
 Identities = 27/59 (45%), Positives = 36/59 (61%)
 Frame = +3

Query: 30  RKFTENPFVPLGCLATAGALSMGLWSFRTGKTRLSQQMMRVRILAQGLTIAALVIGVVI 206
           +K   NP VPLG LAT G L   + +     +R +Q  MR R++AQG T+AALV G V+
Sbjct: 50  QKALNNPLVPLGMLATTGCLIGMMVATLRRSSRGAQYFMRGRVVAQGFTVAALVGGAVM 108


>Z75553-3|CAA99948.1|  407|Caenorhabditis elegans Hypothetical
           protein ZC443.3 protein.
          Length = 407

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 121 FPVLKLQRPMDKAPAVAKQPRGTNGFSVNFL 29
           F VLKL+R  D+  A  KQP  T   ++  L
Sbjct: 83  FHVLKLERHFDRMIATRKQPDVTGDMAIQIL 113


>Z19157-4|CAA79570.1| 1474|Caenorhabditis elegans Hypothetical
           protein ZC84.6 protein.
          Length = 1474

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 131 LSANDESENSCTRAYHCCF 187
           +S NDE +N+C +++ C +
Sbjct: 731 ISCNDELQNNCPKSFQCIY 749


>AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3b protein.
          Length = 131

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 81  GALSMGLWSFRTGKTRLSQQMMRVRI-LAQGLTIAALVIGV 200
           GAL +   SFR   T  ++ + R+R+ LAQ     AL IGV
Sbjct: 14  GALKVRQTSFRAALTLTNEAVSRIRVLLAQQNDANALKIGV 54


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
           protein ZC84.1 protein.
          Length = 1556

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 131 LSANDESENSCTRAYHCCFSYWCSNH 208
           ++ N+   NSC   Y C F+   +NH
Sbjct: 811 INCNEALSNSCPSGYACTFNPLINNH 836


>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
           protein Y116A8C.36 protein.
          Length = 1097

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 85  APAVAKQPRGTNGFSVNF 32
           APA A  P  TNGF  NF
Sbjct: 605 APAPAPAPTTTNGFPANF 622


>AF077532-1|AAC26268.1|  301|Caenorhabditis elegans Hypothetical
           protein F40B1.1 protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 32  KIYRESVCSSRLFSNSWSFIHGSLEF*NW 118
           K YRE    +  FSN+ S+ +G+ EF +W
Sbjct: 81  KAYREDDNFNFQFSNAHSYGNGTTEFISW 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,291,510
Number of Sequences: 27780
Number of extensions: 86434
Number of successful extensions: 227
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)