Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p11
         (283 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   2.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   2.2  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   2.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   3.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   6.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 21  KFHRKFTENPFVPLGCLATAGALSMGLWSFRTGKTRLSQ 137
           K+ R++ +N F+P  CL     L   L S R GK   S+
Sbjct: 115 KYLRRYEDNIFLPEDCLLFTIELDRVLESPR-GKYEFSK 152


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 21  KFHRKFTENPFVPLGCLATAGALSMGLWSFRTGKTRLSQ 137
           K+ R++ +N F+P  CL     L   L S R GK   S+
Sbjct: 130 KYLRRYEDNIFLPEDCLLFTIELDRVLESPR-GKYEFSK 167


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 99  LWSFRTGKTRLSQQMMRV 152
           +W+  TGKT   QQ   V
Sbjct: 166 VWAIGTGKTATPQQAQEV 183


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/41 (19%), Positives = 21/41 (51%)
 Frame = +2

Query: 59   SRLFSNSWSFIHGSLEF*NWKDKTLSANDESENSCTRAYHC 181
            +++ S+S + +HG  ++ N+  + L+     +   +   HC
Sbjct: 1133 TKITSSSETILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHC 1173


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 88  YPWVFGV 108
           YPWV GV
Sbjct: 105 YPWVLGV 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,361
Number of Sequences: 438
Number of extensions: 1182
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)