Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8p03
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    30   0.014
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.71 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.7  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 30.3 bits (65), Expect = 0.014
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 312 VCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
           +C++C++ F   Y  +IH  TH       +    C  C   F  QD L+ H
Sbjct: 81  ICKYCNRQFTKSYNLLIHERTH-----TDERPYSCDICGKAFRRQDHLRDH 126


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 20/84 (23%), Positives = 34/84 (40%)
 Frame = +3

Query: 216 KQTTSDSEDELPLTKLCSDANSYKSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLI 395
           K+ T   E++ P +   S +   K  +R+    CE C++ F  ++    H  TH      
Sbjct: 105 KRKTWKVEEDSP-SPTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHVLQNHERTH-----T 158

Query: 396 KDSLKQCLSCKLYFPSQDDLKCHV 467
            +   +C  C   F     LK H+
Sbjct: 159 GEKPFECQECHKRFTRDHHLKTHM 182


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 264  CSDANSYKSLTRNSIEVCEFCDKVF--KNRYKSIIHTMTHITIPLIKD 401
            C+DA     +T +SI  C FCD  F  K  Y+  +  M  +   +I D
Sbjct: 1043 CNDA----VMTSDSIMKCAFCDTPFISKGAYRHHLSKMHFVKDGVIPD 1086



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 390  LIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIKID 491
            +  DS+ +C  C   F S+   + H++K H   D
Sbjct: 1048 MTSDSIMKCAFCDTPFISKGAYRHHLSKMHFVKD 1081



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 147 NLIINCYV*EFLSANFIKMKKRRKQTTSDSEDELPLTKL 263
           +++ N +  E +  +  +   RR+QT    +  LP+ KL
Sbjct: 566 HMVKNSHYKEHIMRSITESGGRRRQTREKRKKSLPVRKL 604


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 87  KTKTNKLFIIFSIRFFVRHV*LFILCV 7
           K +T K+ II  + FFV     +++C+
Sbjct: 270 KVRTLKMTIIIVLVFFVCWTPYYVMCI 296


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 87  KTKTNKLFIIFSIRFFVRHV*LFILCV 7
           K +T K+ II  + FFV     +++C+
Sbjct: 270 KVRTLKMTIIIVLVFFVCWTPYYVMCI 296


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 216 KQTTSDSEDELP 251
           K ++SDSEDE P
Sbjct: 98  KDSSSDSEDERP 109


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 189 NFIKMKKRRKQTTSDSEDELPLT 257
           N +K    R+QTT+   DEL +T
Sbjct: 322 NVLKKIALRRQTTNGDLDELIVT 344


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 189 NFIKMKKRRKQTTSDSEDELPLT 257
           N +K    R+QTT+   DEL +T
Sbjct: 248 NVLKKIALRRQTTNGDLDELIVT 270


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = -1

Query: 126 NLLHNIKNNW*QLKTKTNKLFII 58
           ++LH ++NN+  +  + N + I+
Sbjct: 322 SILHELRNNYFHMDLENNVIIIL 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,738
Number of Sequences: 336
Number of extensions: 3068
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)