BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8p03
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 36 0.019
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 36 0.019
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 36 0.019
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 36 0.019
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 36 0.019
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical pr... 36 0.019
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390548-1|AAQ94960.1| 352|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390547-1|AAQ94959.1| 337|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class I... 36 0.019
AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class I... 36 0.019
AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical ... 34 0.075
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical ... 32 0.30
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 32 0.40
Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc... 31 0.53
AF016683-6|AAY55869.1| 130|Caenorhabditis elegans Hypothetical ... 31 0.53
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 31 0.70
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 31 0.92
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z47068-4|CAA87332.1| 153|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical p... 30 1.6
U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 30 1.6
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 30 1.6
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical p... 29 3.7
Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical p... 29 3.7
Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 28 4.9
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 28 4.9
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 28 4.9
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 28 4.9
AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical ... 28 4.9
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 28 4.9
Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical pr... 28 6.5
U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF408762-1|AAO27841.1| 242|Caenorhabditis elegans unknown prote... 28 6.5
AF098991-1|AAC67449.2| 758|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81089-5|CAD89731.2| 933|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 27 8.6
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 27 8.6
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 27 8.6
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1526 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1581
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1594 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1649
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1594 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1649
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1594 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1649
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1594 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1649
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1594 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1649
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 1152 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 1207
>Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical
protein T05A10.1h protein.
Length = 537
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 242 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 297
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 593 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 648
>AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 537
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 242 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 297
>AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 411
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 116 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 171
>AY390548-1|AAQ94960.1| 352|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 352
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 57 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 112
>AY390547-1|AAQ94959.1| 337|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 337
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 42 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 97
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 497 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 552
>AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class IIa
protein.
Length = 468
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 174 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 229
>AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class Ib
protein.
Length = 521
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 14 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 69
>AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 591
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTH-ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C+ CD+ F+ +H TH I + K+ + QC CK+ ++ L+ H+ + H
Sbjct: 51 CDQCDRTFRKISDLTLHQHTHNIEMQQSKNRMYQCSECKIPIRTKAQLQKHLERNH 106
>AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical
protein Y5F2A.4 protein.
Length = 454
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH----- 479
C CDKVF H MTH+ + C C+ F + L HV++KH
Sbjct: 45 CSMCDKVFPRLSHLQRHQMTHLNV-----RNYSCTFCEEKFVQKSHLTRHVSRKHSNAPG 99
Query: 480 IKIDYTS 500
+++D+T+
Sbjct: 100 VEVDWTA 106
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 276 NSYKSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLIKDSL-KQCLSCKLYFPSQDD 452
NS SL R ++ C+FC+ VF+ + IH + + +D L C C+L F +
Sbjct: 233 NSALSLKR--LQTCQFCNAVFRTVHLKTIHV---VKCHMEQDHLDTTCNICELDFGNSIA 287
Query: 453 LKCHVAKKHI 482
L H+ KKHI
Sbjct: 288 LNTHM-KKHI 296
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 276 NSYKSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLIKDSL-KQCLSCKLYFPSQDD 452
NS SL R ++ C+FC+ VF+ + IH + + +D L C C+L F +
Sbjct: 232 NSALSLKR--LQTCQFCNAVFRTVHLKTIHV---VKCHMEQDHLDTTCNICELDFGNSIA 286
Query: 453 LKCHVAKKHI 482
L H+ KKHI
Sbjct: 287 LNTHM-KKHI 295
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 276 NSYKSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLIKDSL-KQCLSCKLYFPSQDD 452
NS SL R ++ C+FC+ VF+ + IH + + +D L C C+L F +
Sbjct: 233 NSALSLKR--LQTCQFCNAVFRTVHLKTIHV---VKCHMEQDHLDTTCNICELDFGNSIA 287
Query: 453 LKCHVAKKHI 482
L H+ KKHI
Sbjct: 288 LNTHM-KKHI 296
>AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical
protein F13H6.1 protein.
Length = 690
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 309 EVCEFCDKVFKNRYKSIIHTMTH 377
E C FC+KVF NR I+H +H
Sbjct: 494 ERCNFCNKVFTNRSNLIVHLRSH 516
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
+C++CD+ F Y +IH TH + C C F QD L+ H
Sbjct: 125 ICKYCDRHFTKSYNLLIHERTH-----TDERPYSCDVCGKAFRRQDHLRDH 170
>Z34799-6|CAA84317.2| 280|Caenorhabditis elegans Hypothetical
protein F34D10.5 protein.
Length = 280
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
+C FC K F + + HT TH + K C C+ F + L+ H+ K H
Sbjct: 162 LCTFCGKGFNDTFDLKRHTRTHTGVRPYK-----CEQCEKSFTQRCSLESHLRKVH 212
>AF134806-1|AAD29691.1| 280|Caenorhabditis elegans putative zinc
finger transcriptionfactor protein.
Length = 280
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
+C FC K F + + HT TH + K C C+ F + L+ H+ K H
Sbjct: 162 LCTFCGKGFNDTFDLKRHTRTHTGVRPYK-----CEQCEKSFTQRCSLESHLRKVH 212
>AF016683-6|AAY55869.1| 130|Caenorhabditis elegans Hypothetical
protein K09F6.11 protein.
Length = 130
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 13/66 (19%)
Frame = +3
Query: 321 FCDKVFKNRYKSIIHTMTHITIPLIKDS-------------LKQCLSCKLYFPSQDDLKC 461
F DK+ +NR+ I+H P I ++ K C C LYF S DD
Sbjct: 14 FADKICRNRHTEIVHFGLQPQDPEITENSFYYMNAHVPQVRAKTCPVCLLYFESIDDCII 73
Query: 462 HVAKKH 479
HV K H
Sbjct: 74 HVNKVH 79
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 31.1 bits (67), Expect = 0.70
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +3
Query: 249 PLTKLCSDANSYKSLTRNS--IEVCEFCDKVFKN-RYKSIIHTMTHITIPLIKDSLKQCL 419
P+ LCS + ++ R S + + + D V + R S+ + P I +
Sbjct: 6 PINILCSSTEDHHTMQRFSKIVNIDPYLDAVNSHHRSLSLFFRSNYSFSPNILKRTETMF 65
Query: 420 SCKLYF-PSQDDLKCHVAKKHIKIDYTSFNGGKTPLPQSQAMRLE-SNVKLEPFCFDNKE 593
+ +F P++ LK +A +K+D F+ KT + + RLE S++K E C D++
Sbjct: 66 AENPFFTPTESKLKSEIALLQMKLDDERFDHQKTRRELANS-RLEISDLKGEAKCHDSEL 124
Query: 594 SNGDVKLKNLK 626
+ + NL+
Sbjct: 125 NRLYTIINNLE 135
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 30.7 bits (66), Expect = 0.92
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
CE C+K F N+ H +TH K+C +C+ F +D L+ H+ H+K
Sbjct: 65 CENCEKQFTNKPNLKRHQITH-----SGSKSKKCSTCQRTFFREDQLQRHL-HNHLK 115
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C FC K F + + H+MTHI D C + F + L+ H+ + H
Sbjct: 163 CRFCKKRFFRKDQMQEHSMTHIKTGFGFDC--PVSQCNMQFSQHNALRAHLEETH 215
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
C FC K F + + H+MTHI D C + F + L+ H+ + H
Sbjct: 163 CRFCKKRFFRKDQMQEHSMTHIKTGFGFDC--PVSQCNMQFSQHNALRAHLEETH 215
>Z47068-4|CAA87332.1| 153|Caenorhabditis elegans Hypothetical
protein F15G9.2 protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 180 LSANFIKMKKRRKQTTSDSEDELPLTKLCSDANSYKSLTRNSIEVCEFCDKVF 338
LS F K+ K R S D LTK+CS + +++ RNS+E F + +
Sbjct: 27 LSERFKKISKTRSIKWSSESD---LTKMCSYDVAVETMRRNSLEEVSFSNNSY 76
>U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical
protein F10E7.1 protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 342 NRYKSIIHTMTHITIPL--IKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
N YKSI+H I I L D ++ L+C++Y P+Q ++ KH K
Sbjct: 190 NNYKSILHFEGMIDICLHGCFDCMRIMLNCEVYGPAQINVIRRKEPKHFK 239
>U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila
odd-skipped-like protein1 protein.
Length = 242
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
+C++C + F Y +IH TH + C +C F QD L+ H
Sbjct: 129 ICKYCARHFTKSYNLMIHERTH-----TNERPFHCETCGKSFRRQDHLRDH 174
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQC--LSCKLYFPSQDDLKCHVAKKHI 482
C+FC + F + H MTHI K + +C +C F S L+ HV +HI
Sbjct: 32 CQFCRRPFFRNDRMKEHMMTHIK----KGNTFECPITACNSKFNSFTSLQFHVDSEHI 85
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIH-TMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
C FCDK F+N H T H P + + QCL C PS DL H
Sbjct: 231 CPFCDKRFRNDISFNNHLTKKH---PECAEFV-QCLHCFKCLPSAADLPTH 277
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIKIDY 494
C++C ++F H H T C +C +F ++D L+ H + H
Sbjct: 231 CDYCPRIFSKLESKTRHHKMHFT-------RSTCQTCMRFFTTEDALRHHQSTAH----P 279
Query: 495 TSFNGGKTP---LPQSQAMR 545
+F+ G P LP ++ R
Sbjct: 280 ATFDSGPPPEDLLPNGKSAR 299
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 378 ITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKH 479
+T P L +C +CK YF +++ + H+ + H
Sbjct: 161 VTTPKALAGLYRCTNCKTYFGNKEVYQRHIQEVH 194
>Z83115-7|CAJ85758.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHIT 383
+C FC + F+ R + I H TH+T
Sbjct: 164 LCAFCGRSFRQRSQQIGHESTHLT 187
>Z83115-6|CAB05558.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHIT 383
+C FC + F+ R + I H TH+T
Sbjct: 230 LCAFCGRSFRQRSQQIGHESTHLT 253
>Z81137-12|CAJ85772.1| 318|Caenorhabditis elegans Hypothetical
protein K11D2.4b protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHIT 383
+C FC + F+ R + I H TH+T
Sbjct: 164 LCAFCGRSFRQRSQQIGHESTHLT 187
>Z81137-11|CAB03472.1| 384|Caenorhabditis elegans Hypothetical
protein K11D2.4a protein.
Length = 384
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHIT 383
+C FC + F+ R + I H TH+T
Sbjct: 230 LCAFCGRSFRQRSQQIGHESTHLT 253
>Z50755-4|CAA90634.1| 369|Caenorhabditis elegans Hypothetical
protein R12H7.4 protein.
Length = 369
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 357 IIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
+I +T+ +K L C++C PSQD +C+ A++ +K
Sbjct: 158 VIPVWVILTLAGLKAQLA-CIACDRQLPSQDIYQCYWARRSVK 199
>Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical
protein R53.3b protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
C+FC KVF H TH + +C C+ F +L+ HV H K
Sbjct: 225 CKFCQKVFPRSANLTRHLRTH-----TGEQPYKCQYCERSFSISSNLQRHVRNIHNK 276
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
C+FC KVF H TH + +C C+ F +L+ HV H K
Sbjct: 446 CKFCQKVFPRSANLTRHLRTH-----TGEQPYKCQYCERSFSISSNLQRHVRNIHNK 497
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 270 DANSYKSLTRNSIEVCEFCDKVFKNRYKS-IIHTMTHITIPLIKDSLKQCLSCKLYFPSQ 446
D+NS + +N + VC +C K+ N K + H M+H ++ + QC +C + ++
Sbjct: 16 DSNSLQQ--QNLLHVCGYCSKLMGNDEKEHLEHAMSH------QNEVTQCRTCCIPV-NK 66
Query: 447 DDLKCHVAKKH 479
++ + H+ + H
Sbjct: 67 EETEDHLKRIH 77
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
C+FC KVF H TH + +C C+ F +L+ HV H K
Sbjct: 225 CKFCQKVFPRSANLTRHLRTH-----TGEQPYKCQYCERSFSISSNLQRHVRNIHNK 276
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHIK 485
C+FC KVF H TH + +C C+ F +L+ HV H K
Sbjct: 446 CKFCQKVFPRSANLTRHLRTH-----TGEQPYKCQYCERSFSISSNLQRHVRNIHNK 497
>AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical
protein Y37E11B.1b protein.
Length = 167
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 312 VCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAK 473
+CE C K + ++ H TH T D C C F D K H+ K
Sbjct: 71 ICEVCGKKYSSKSALAKHKRTHET-----DKRFTCPMCYASFDLSDPFKIHLRK 119
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCHVAKKHI 482
CE C F + +H H + + CK F S LK HV KKH+
Sbjct: 481 CEICGMAFSQKTPMRLHLRRHFDQKPYECDVD---GCKERFVSGAILKMHVEKKHL 533
>Z32683-3|CAA83620.1| 124|Caenorhabditis elegans Hypothetical
protein R07E5.5 protein.
Length = 124
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Frame = +3
Query: 297 RNSIEVCEFCDKVFKNRYKSIIHTMTH--------ITIPLIKDSLKQCLSCKLYFPSQDD 452
R + C+ C+K FK + + H + +++ KD++ +CL C F ++D
Sbjct: 24 RKNSGTCDLCEKNFKTSEELVEHKKNYPRADVEKALSVYKEKDTIYKCLQCSGEFRLKED 83
Query: 453 LKCH 464
H
Sbjct: 84 FDYH 87
>U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical
protein F26A10.2 protein.
Length = 620
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 315 CEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
C C + F N+ + + HT TH + + +C C F SQ L+ H
Sbjct: 299 CSNCRQAFDNKKELMRHTQTH----TMDGGIFRCFECCGQFKSQIALRRH 344
>AF408762-1|AAO27841.1| 242|Caenorhabditis elegans unknown protein
protein.
Length = 242
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 501 FNGGKTPLPQSQAMRLESNVKLEPFCFDNKE---SNGDVKLK 617
F G +P + E +VKLEP ++N E N ++KL+
Sbjct: 87 FCGDNFQIPPKKPFLAEEDVKLEPMEYENSEQIVENAEIKLE 128
>AF098991-1|AAC67449.2| 758|Caenorhabditis elegans Hypothetical
protein F59H5.1 protein.
Length = 758
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 501 FNGGKTPLPQSQAMRLESNVKLEPFCFDNKE---SNGDVKLK 617
F G +P + E +VKLEP ++N E N ++KL+
Sbjct: 603 FCGDNFQIPPKKPFLAEEDVKLEPMEYENSEQIVENAEIKLE 644
>Z81089-5|CAD89731.2| 933|Caenorhabditis elegans Hypothetical
protein F53H4.6 protein.
Length = 933
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 201 MKKRRKQTTSDSEDELPLTKLCSD-ANSYKSLTRNSIEVCEFCDKV-FKNRYKSIIHTMT 374
++KR KQTT DS+D++ + + + NS++ T +SI+ D + +N + I + T
Sbjct: 113 IEKRHKQTTVDSDDDVMIIERTPEKTNSFE--TPDSIDDDNMSDDMRCRNTFPYIPESRT 170
Query: 375 HIT 383
+T
Sbjct: 171 TVT 173
>Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical
protein C34C6.3 protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 478 CFFAT*HFRSSCDGKYNLQLRHCF 407
CF + F CD K+N Q HCF
Sbjct: 191 CFCSYGFFGQRCDQKFNSQNDHCF 214
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 285 KSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
K T SI C C K F N IHT + +K +C C + + +L H
Sbjct: 20 KPHTAGSIFTCVMCSKAFPNAEALQIHTDQVHDLSRLK---HRCKLCGKAYKRKKNLDAH 76
Query: 465 VAKKHIK 485
+A H+K
Sbjct: 77 MA-LHLK 82
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +3
Query: 285 KSLTRNSIEVCEFCDKVFKNRYKSIIHTMTHITIPLIKDSLKQCLSCKLYFPSQDDLKCH 464
K T SI C C K F N IHT + +K +C C + + +L H
Sbjct: 138 KPHTAGSIFTCVMCSKAFPNAEALQIHTDQVHDLSRLK---HRCKLCGKAYKRKKNLDAH 194
Query: 465 VAKKHIK 485
+A H+K
Sbjct: 195 MA-LHLK 200
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 435 FPSQDDLKCHVAKKHIKIDYTSFNGGKTPLPQSQAMRLESNVKLEPFCFDNKESNGDVKL 614
+ + + K H A+ I+Y G KT P++Q M ESN + + + DVK+
Sbjct: 127 YNNSSEEKTHSAENQDNIEY----GVKTEPPENQPMPTESNNQTQSDDGETTGEQKDVKI 182
Query: 615 KNL 623
++L
Sbjct: 183 ESL 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,067,516
Number of Sequences: 27780
Number of extensions: 259511
Number of successful extensions: 921
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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