Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8p01
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts prot... 134 3e-31
AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts pr... 131 2e-30
BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein. 128 1e-29
BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongati... 120 5e-27
Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein. 31 3.7
BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein. 31 3.7
BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein. 31 3.7
AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein. 31 3.7
AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein. 31 3.7
AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein. 31 3.7
AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein. 31 3.7
AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein. 31 3.7
AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein pro... 31 3.7
>L37936-1|AAC37577.1| 294|Homo sapiens elongation factor Ts
protein.
Length = 294
Score = 134 bits (324), Expect = 3e-31
Identities = 71/164 (43%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Frame = +2
Query: 179 RIHTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWA 352
R++ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+
Sbjct: 2 RVYAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWS 61
Query: 353 KATKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTK 532
KA KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 62 KAAKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTL 121
Query: 533 LQAKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGEN 658
+K L+S +L L A ++ L + LAL IG +GEN
Sbjct: 122 KDQPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGEN 165
>AF110399-1|AAD20224.1| 325|Homo sapiens elongation factor Ts
protein.
Length = 325
Score = 131 bits (316), Expect = 2e-30
Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 4/162 (2%)
Frame = +2
Query: 185 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 358
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 359 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 538
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 539 AKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGEN 658
+K L+S +L L A ++ L + LAL IG +GEN
Sbjct: 155 QPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGEN 196
>BC093068-1|AAH93068.1| 325|Homo sapiens TSFM protein protein.
Length = 325
Score = 128 bits (310), Expect = 1e-29
Identities = 69/161 (42%), Positives = 96/161 (59%), Gaps = 4/161 (2%)
Frame = +2
Query: 185 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 358
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 359 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 538
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 539 AKGPITKMELDSEQLGTLHAEGGKK--LSEILALFIGSVGE 655
+K L+S +L L A ++ L + LAL IG +GE
Sbjct: 155 QPSAYSKGFLNSSELSGLPAGPDREGSLKDQLALAIGKLGE 195
>BC022862-1|AAH22862.1| 346|Homo sapiens Ts translation elongation
factor, mitochondrial protein.
Length = 346
Score = 120 bits (289), Expect = 5e-27
Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +2
Query: 185 HTSPAYKAAESS--LLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQAMGWAKA 358
+ P A+ SS LL KLR+KTGY+ NCKKALE D +AE WLH++AQ GW+KA
Sbjct: 35 YAGPRLSASASSKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKA 94
Query: 359 TKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKFAHTKLQ 538
KL GR +GL+ + + N LVE+NCETDFV++N KFQ +++ A+ + T
Sbjct: 95 AKLQGRKTKEGLIGLLQEGNTTVLVEVNCETDFVSRNLKFQLLVQQVALGTMMHCQTLKD 154
Query: 539 AKGPITKME-LDSEQLGTLHAEGGKKLSEIL 628
+K++ L L AE G L L
Sbjct: 155 QPSAYSKVQWLTPVNLALWEAEAGGSLEGFL 185
>Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein.
Length = 715
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
>AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein
protein.
Length = 685
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 161 IFQLIRRIHTSPAYKAAESSLLAKLRKKTGYTIANCKKALEMHNNDADKAETWLHEQAQA 340
+ ++I++ A K E+ ++ KLRK +ANC++ LE ++AE L E QA
Sbjct: 269 LVEIIQQRKQMIAVKIKETKVM-KLRK-LAQQVANCRQCLERSTVLINQAEHILKENDQA 326
Query: 341 MGWAKATKLAGRTAL 385
A +A R A+
Sbjct: 327 RFLQSAKNIAERVAM 341
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,405,543
Number of Sequences: 237096
Number of extensions: 2027710
Number of successful extensions: 11084
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11081
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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