Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8o24
(620 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UK41 Cluster: Vacuolar protein sorting-associated pro... 167 2e-40
UniRef50_Q86E08 Cluster: Clone ZZZ359 mRNA sequence; n=1; Schist... 138 7e-32
UniRef50_Q9NA26 Cluster: Vacuolar protein sorting-associated pro... 110 3e-23
UniRef50_Q9S9T7 Cluster: Vacuolar protein sorting-associated pro... 88 1e-16
UniRef50_Q5KNG8 Cluster: Vps28 protein, putative; n=1; Filobasid... 76 6e-13
UniRef50_A2WVR1 Cluster: Putative uncharacterized protein; n=3; ... 67 3e-10
UniRef50_Q8WZL1 Cluster: Vps28 protein; n=1; Yarrowia lipolytica... 60 6e-08
UniRef50_Q02767 Cluster: Vacuolar protein sorting-associated pro... 59 7e-08
UniRef50_A4RRM3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 57 4e-07
UniRef50_O13872 Cluster: Vacuolar protein sorting-associated pro... 57 4e-07
UniRef50_A7AS71 Cluster: Vacuolar sorting protein 28, putative; ... 56 7e-07
UniRef50_Q4P529 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q4Q0P5 Cluster: Vacuolar protein sorting-associated pro... 50 3e-05
UniRef50_Q383K5 Cluster: Vacuolar sorting-associated protein-lik... 49 8e-05
UniRef50_Q6YQC0 Cluster: Arginyl-tRNA synthetase; n=3; Bacteria|... 37 0.45
UniRef50_UPI0000EBD935 Cluster: PREDICTED: similar to olfactory ... 35 1.8
UniRef50_Q6ZS38 Cluster: CDNA FLJ45860 fis, clone OCBBF2036019, ... 35 1.8
UniRef50_Q4UIT7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_A0BQV7 Cluster: Chromosome undetermined scaffold_121, w... 33 7.3
UniRef50_Q4S937 Cluster: Chromosome 3 SCAF14700, whole genome sh... 32 9.6
UniRef50_A6PL26 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
>UniRef50_Q9UK41 Cluster: Vacuolar protein sorting-associated
protein 28 homolog; n=36; Eumetazoa|Rep: Vacuolar
protein sorting-associated protein 28 homolog - Homo
sapiens (Human)
Length = 221
Score = 167 bits (405), Expect = 2e-40
Identities = 79/137 (57%), Positives = 97/137 (70%)
Frame = +1
Query: 208 TRKHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAAL 387
T + LEKAY++DCV EYTAACSRLLVQYK AF+QVQ E +I+ F K+RLDCP A+
Sbjct: 48 TMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAM 107
Query: 388 ERIRENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPEXXXXXXXXXXX 567
ERI+E++P IKDDKGN N+ IA++VSLFIT+MDKLRLE RAMD IQP+
Sbjct: 108 ERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
Query: 568 XXXXXXFEGKLKVQEWL 618
FEG+ V +WL
Sbjct: 168 SHLPPDFEGRQTVSQWL 184
Score = 39.9 bits (89), Expect = 0.048
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 161 RPELYEEIKLYKNARERE 214
+PELYEE+KLYKNARERE
Sbjct: 17 KPELYEEVKLYKNARERE 34
>UniRef50_Q86E08 Cluster: Clone ZZZ359 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZZ359 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 214
Score = 138 bits (335), Expect = 7e-32
Identities = 68/121 (56%), Positives = 83/121 (68%)
Frame = +1
Query: 256 QEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKG 435
Q AACS+LLVQY+ AFKQVQ DEF +E F+ KY++DCPAALERI+E +P IKD+K
Sbjct: 36 QSIHAACSKLLVQYEAAFKQVQGDEFSTVEDFMRKYKMDCPAALERIKEGRPITIKDNKQ 95
Query: 436 NTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPEXXXXXXXXXXXXXXXXXFEGKLKVQEW 615
N NK IA+ VSLFIT+MDKLRLE RA+D I P+ FEGK +V+ W
Sbjct: 96 NINKCIADTVSLFITVMDKLRLEIRAVDEIHPDLRELYETLCRLSILPPDFEGKDRVKVW 155
Query: 616 L 618
L
Sbjct: 156 L 156
>UniRef50_Q9NA26 Cluster: Vacuolar protein sorting-associated
protein 28 homolog; n=2; Caenorhabditis|Rep: Vacuolar
protein sorting-associated protein 28 homolog -
Caenorhabditis elegans
Length = 210
Score = 110 bits (264), Expect = 3e-23
Identities = 55/106 (51%), Positives = 70/106 (66%)
Frame = +1
Query: 214 KHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALER 393
+HLEK + RD V A EY + C +L+ QYKV + V +IE F KYRL CPAA+ER
Sbjct: 38 EHLEKMFSRDHVSADEYKSECFKLIDQYKVTMRLVHGAT--SIEDFAKKYRLHCPAAIER 95
Query: 394 IRENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQP 531
IRE +P +KDD+GN K+IA IV FIT +D LRL RA+D + P
Sbjct: 96 IREGRPITVKDDQGNVLKHIASIVEQFITFLDALRLNTRAVDDLYP 141
>UniRef50_Q9S9T7 Cluster: Vacuolar protein sorting-associated
protein 28 homolog 1; n=4; Eukaryota|Rep: Vacuolar
protein sorting-associated protein 28 homolog 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 210
Score = 88.2 bits (209), Expect = 1e-16
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Frame = +1
Query: 220 LEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALER-I 396
LEKAY+RD + EY + C +L+V +K ++ D PNIE F Y++DCPAAL R +
Sbjct: 32 LEKAYIRDLINPSEYESECQKLIVHFKTLSATLK-DTVPNIERFADTYKMDCPAALYRLV 90
Query: 397 RENKPNLIKD------DKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPEXXXXXXXX 558
P ++ N+ +AE V FIT MD L+L A+D + P
Sbjct: 91 TSGLPATVEHRATVAASTSNSASIVAECVQNFITSMDSLKLNMVAVDQVYPLLSDLSASL 150
Query: 559 XXXXXXXXXFEGKLKVQEWL 618
FEGK K++EWL
Sbjct: 151 NKLSILPPDFEGKTKMKEWL 170
>UniRef50_Q5KNG8 Cluster: Vps28 protein, putative; n=1;
Filobasidiella neoformans|Rep: Vps28 protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 184
Score = 76.2 bits (179), Expect = 6e-13
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Frame = +1
Query: 214 KHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALER 393
++LE+AY+RD V +EY AC +LL QYK K V AD+ +EAF+ ++++D PAAL R
Sbjct: 34 EYLERAYVRDSVSGKEYAPACLKLLAQYKSLMKLV-ADDIGGVEAFMKRFKMDHPAALHR 92
Query: 394 IRENKPNLI------KDDKGNTNKYIAEIV---SLFITLMDKLRLEFRAMDMIQP 531
+ P + +D K+ + ++ FIT MD L+L +A D + P
Sbjct: 93 LTVGVPATVEHSAEAEDGGAEKGKWCSLLIITEQSFITFMDALKLNLKAKDQLHP 147
>UniRef50_A2WVR1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 253
Score = 67.3 bits (157), Expect = 3e-10
Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Frame = +1
Query: 220 LEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALER-I 396
LE+AY+RD V A +Y A C +L+ Q+ + I FV YRLDCPAAL R +
Sbjct: 71 LERAYVRDLVSAADYEAECLKLISQFNSLSSSLAG--VVTIPRFVEAYRLDCPAALNRLV 128
Query: 397 RENKPNLIK----------DDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPEXXXX 546
+ P ++ + IA+ V FIT MD ++L A D ++P
Sbjct: 129 QSGVPATVELRAAASSSAPASSAASAAAIAQCVQSFITAMDAVKLNMLANDQVRPLLHDL 188
Query: 547 XXXXXXXXXXXXX-FEGKLKVQEWL 618
FEGK+KV EWL
Sbjct: 189 STSMGKLGPVLPPDFEGKVKVSEWL 213
>UniRef50_Q8WZL1 Cluster: Vps28 protein; n=1; Yarrowia
lipolytica|Rep: Vps28 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 246
Score = 59.7 bits (138), Expect = 6e-08
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 27/161 (16%)
Frame = +1
Query: 217 HLEKAYMRDCVRAQEYTAACSRLLVQYKVAFK-QVQADEFPNIEAFVAKYRLDCPAALER 393
+LEKA+++D V Q+Y++ C+RLL QY K + +EF +++ F KY LDC A +R
Sbjct: 52 YLEKAFLKDSVSQQDYSSICTRLLSQYNTLLKDEGVQNEFVSLQHFKDKYGLDCSLATQR 111
Query: 394 IRENKP----------------NLIKDDKG----------NTNKYIAEIVSLFITLMDKL 495
I P N+ D G +T++ +AE FIT MD L
Sbjct: 112 ISVGIPASVVIASQASSALASTNIGGMDGGGRSTPTGEGPSTSRAVAEATGNFITCMDAL 171
Query: 496 RLEFRAMDMIQPEXXXXXXXXXXXXXXXXXFEGKLKVQEWL 618
+L + A D + P F G+ K+ +WL
Sbjct: 172 KLNYSATDQLHP--LLGDLMTSLGKVTNKDFAGRDKIVKWL 210
>UniRef50_Q02767 Cluster: Vacuolar protein sorting-associated
protein 28; n=10; Saccharomycetales|Rep: Vacuolar
protein sorting-associated protein 28 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 242
Score = 59.3 bits (137), Expect = 7e-08
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Frame = +1
Query: 208 TRKHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADE----FPNIEAFVAKYRLDC 375
T H+EKAY++D + +YT +LL Q+KV +E F +IEAF Y +
Sbjct: 49 TLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFCDTYNITA 108
Query: 376 PAALERIR--------------------ENKPNLIKDDKGNTNKYIAEIVSLFITLMDKL 495
A+ R+ +NK + D K N KY+AE FIT+MD L
Sbjct: 109 SNAITRLERGIPITAEHAISTTTSAPSGDNKQSSSSDKKFNA-KYVAEATGNFITVMDAL 167
Query: 496 RLEFRAMDMIQP 531
+L + A D + P
Sbjct: 168 KLNYNAKDQLHP 179
>UniRef50_A4RRM3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 218
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Frame = +1
Query: 220 LEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIR 399
LE+AY+R V A+ Y AC L ++K + V D P+++ F+ Y PAA R+
Sbjct: 41 LERAYVRSSVDAKAYERACVDLTSKFK-TLRSVLRDSVPDLDRFLETYGARVPAARRRLE 99
Query: 400 ENKPNLIK--------DDKGNTN-KYIAEIVSLFITLMDKLRLEFRAMDMIQPEXXXXXX 552
P + + +G + +A+ FI +MD ++L+ RA D + P
Sbjct: 100 AGVPATAEHGGAARGTEAEGRAEARAVADATHCFIGVMDTVKLDMRAKDQVAPALGDLLL 159
Query: 553 XXXXXXXXXXXFEGKLKVQEWL 618
FEG V++W+
Sbjct: 160 ALCKVSRLPNDFEGTKCVRKWV 181
>UniRef50_O13872 Cluster: Vacuolar protein sorting-associated
protein 28 homolog; n=1; Schizosaccharomyces pombe|Rep:
Vacuolar protein sorting-associated protein 28 homolog -
Schizosaccharomyces pombe (Fission yeast)
Length = 248
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 214 KHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADE-FPNIEAFVAKYRLDCPAALE 390
+ LEKA+ +D V ++ + C L+ Q++ F + + F + E F +KYRL CP A++
Sbjct: 42 EQLEKAFTKDAVSTSDFNSTCELLIQQWESCFSDERVTQAFGSFEDFCSKYRLQCPRAIK 101
Query: 391 RIRENKPNLIKDDKGNTNKYIAEIVS 468
RI+E I D++ +N + +S
Sbjct: 102 RIQEG----ISDERSQSNSTFSNAIS 123
>UniRef50_A7AS71 Cluster: Vacuolar sorting protein 28, putative;
n=1; Babesia bovis|Rep: Vacuolar sorting protein 28,
putative - Babesia bovis
Length = 222
Score = 56.0 bits (129), Expect = 7e-07
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Frame = +1
Query: 214 KHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNI-EAFVAKYRLDCPAALE 390
+HLE +++ V +EY C+ LL + Q+ + PN+ EA +Y + CP AL
Sbjct: 30 EHLEDSFISGYVTEKEYAEECNELL-----SLCQILEEATPNVFEALAKEYNVKCPLALN 84
Query: 391 RIRENKP----NLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMI 525
R+R+ P N I+ +K N + E+ FITL+D L+L +++ +
Sbjct: 85 RLRKGTPGIQNNNIQKNKSNDAYLMFELSEQFITLVDALKLGCNSVEEV 133
>UniRef50_Q4P529 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 170
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Frame = +1
Query: 217 HLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADE------FPNIEAFVAKYRLDCP 378
+LE+AY+R+ + +EY C+RLL Q K K + E ++ F+ Y+++
Sbjct: 42 YLERAYVRESISEKEYAPTCTRLLAQCKTMLKLIVDQEKHSSKPITDLADFMRIYKMNYL 101
Query: 379 AALERIRENKPNLIK-------DDKGNTNKYIAEIVSLFITLMDKLRLEFRAM 516
AA+ R+ P ++ + K++AE FIT MD L+L+ A+
Sbjct: 102 AAVHRLTVGVPATVEHASSSSLQSSSDRAKWVAETTQNFITFMDALKLKLLAV 154
>UniRef50_Q4Q0P5 Cluster: Vacuolar protein sorting-associated
protein-like protein; n=3; Leishmania|Rep: Vacuolar
protein sorting-associated protein-like protein -
Leishmania major
Length = 209
Score = 50.4 bits (115), Expect = 3e-05
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +1
Query: 214 KHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADE---FPNIEAFVAKYRLDCPAA 384
+ +EKA RD + +Y + RLL +YK +Q F I+ F KY C AA
Sbjct: 28 EQIEKANRRDLINPNQYDSTVRRLLEKYKNTVAHLQGARNPYFTTIDDFFDKYCARCLAA 87
Query: 385 LERIRENKPNLIKDDKGN-TNKYIAEIVSLFITLMDKLRLEFRAMDMIQP 531
IR+ + ++ + E FITL+D LRL+ ++D++ P
Sbjct: 88 RATIRDGPMSRPTENNARFLARQSVECSDHFITLLDSLRLQQTSVDVLNP 137
>UniRef50_Q383K5 Cluster: Vacuolar sorting-associated protein-like,
putative; n=2; Trypanosoma|Rep: Vacuolar
sorting-associated protein-like, putative - Trypanosoma
brucei
Length = 218
Score = 49.2 bits (112), Expect = 8e-05
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 12/114 (10%)
Frame = +1
Query: 220 LEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFP---NIEAFVAKYRLDCPAALE 390
+EKA +RD + ++Y++ +RLL +YK ++ P I++F Y CPAA
Sbjct: 31 VEKATLRDIITQEQYSSTITRLLDKYKSTVTYLEQSRNPFYSTIDSFWENYGSRCPAART 90
Query: 391 RI--------RENKPNLIKDDKGNTN-KYIAEIVSLFITLMDKLRLEFRAMDMI 525
RI ++ + D G + + + E FITLMD L+L+ A+D +
Sbjct: 91 RIQLSFDDAKQQQQQQQDSDVNGTVDPRLVLECGQHFITLMDSLKLQQTAVDQL 144
>UniRef50_Q6YQC0 Cluster: Arginyl-tRNA synthetase; n=3;
Bacteria|Rep: Arginyl-tRNA synthetase - Onion yellows
phytoplasma
Length = 557
Score = 36.7 bits (81), Expect = 0.45
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +1
Query: 280 RLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAE 459
+LL Q+ + ++ Q D P+I +A+Y L + + + ++ DDK TN +
Sbjct: 479 KLLDQFPLILQKAQKDNMPSI---LARYMLKITQNVNFLYSQE-KILTDDKTTTNTNLLL 534
Query: 460 IVSLFITLMDKLRL 501
I ++FITL + LR+
Sbjct: 535 IQAVFITLKESLRI 548
>UniRef50_UPI0000EBD935 Cluster: PREDICTED: similar to olfactory
receptor MOR171-14; n=2; Bos taurus|Rep: PREDICTED:
similar to olfactory receptor MOR171-14 - Bos taurus
Length = 314
Score = 34.7 bits (76), Expect = 1.8
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Frame = -3
Query: 489 IH*GYK*RYNFCNV-FISVPFVILDEIRFVLSYSFQSSRTV*PVFS--NKSFNIGKLISL 319
IH G+ R +FC I+ F + + + S + + VFS N + +++
Sbjct: 146 IHTGFMLRLHFCKANVINHYFCDVFPLLELSCSSISMNELLALVFSAFNVLIPVLTILAS 205
Query: 318 YLFESHFVLHEETTACRRVFLCSHTITHVCLLQVFSRSRAFLY---NLISSYNSGRVSCI 148
Y+F +LH +T R S +H+ + VF S AF+Y + +SS + G+VS +
Sbjct: 206 YIFILSTILHIHSTEGRSKAF-STCSSHISAVAVFYGSAAFMYLKPSSVSSMDQGKVSSV 264
Query: 147 F 145
F
Sbjct: 265 F 265
>UniRef50_Q6ZS38 Cluster: CDNA FLJ45860 fis, clone OCBBF2036019,
moderately similar to NADH- ubiquinone oxidoreductase 20
kDa subunit, mitochondrial; n=1; Homo sapiens|Rep: CDNA
FLJ45860 fis, clone OCBBF2036019, moderately similar to
NADH- ubiquinone oxidoreductase 20 kDa subunit,
mitochondrial - Homo sapiens (Human)
Length = 294
Score = 34.7 bits (76), Expect = 1.8
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -1
Query: 380 AGQSNLYLATKASILGNSSACTCLKATLY---CTRRRLH--AAVYSCARTQSRMYAFSRC 216
A ++++ T A + ++ TC + CT +H A +Y+C RT + +
Sbjct: 140 AHNAHMHTRTHAHLHTHAHTSTCAHTLAHIHTCTLALMHTHAHIYTCTRTLAHTCTYMHS 199
Query: 215 FLVHAHFCTI*SLHTIPDV 159
HAH CT+ +HT P V
Sbjct: 200 ---HAHTCTLTHMHTRPCV 215
>UniRef50_Q4UIT7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 428
Score = 32.7 bits (71), Expect = 7.3
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 337 NIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAM 516
N++ F K D P+ L+ I N + + + N Y E SL TL+DK L +
Sbjct: 124 NLKLFATKLIFDLPSHLDSINYNNISKLCESLCFLNLYSEEFASLISTLVDKKTLARGEI 183
Query: 517 DMI 525
+M+
Sbjct: 184 EML 186
>UniRef50_A0BQV7 Cluster: Chromosome undetermined scaffold_121,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_121,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 216
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +1
Query: 313 QVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLFI 477
Q Q+ E PN++ + K +DC LE+ +++ L+K+ + +Y+ E+ +I
Sbjct: 110 QQQSTEVPNLQEKMLKLLIDCRQYLEKRTDHEAILLKEQQDQFFQYLQELNQPYI 164
>UniRef50_Q4S937 Cluster: Chromosome 3 SCAF14700, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14700, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1464
Score = 32.3 bits (70), Expect = 9.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 265 CIPVLAHNHACMPSPGVFSFTRIFVQFNL 179
C VL H H C+P P + ++T FV F+L
Sbjct: 81 CDQVLDHIHDCLPYPSLLNYTSPFVVFSL 109
>UniRef50_A6PL26 Cluster: Putative uncharacterized protein; n=1;
Victivallis vadensis ATCC BAA-548|Rep: Putative
uncharacterized protein - Victivallis vadensis ATCC
BAA-548
Length = 93
Score = 32.3 bits (70), Expect = 9.6
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 338 LGNSSACTCLKATLYCTRRRLHAAVYSCARTQSRMYAFSRCFLVHAHFCTI*SL 177
LGN + C K++ +C R SC T RM S+ FL+HAH I +L
Sbjct: 19 LGNRAKIVCQKSSAFCGNFRKSRYGRSCT-TTVRM--ISKSFLMHAHLAVILAL 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,403,618
Number of Sequences: 1657284
Number of extensions: 10808149
Number of successful extensions: 27355
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 26326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27323
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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