Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o24
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-11|CAB54493.1|  210|Caenorhabditis elegans Hypothetical...   110   9e-25
Z73973-1|CAA98266.1|  357|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z77661-8|CAB01189.1|  438|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z99281-55|CAN99710.1|   74|Caenorhabditis elegans Hypothetical p...    27   8.2  
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for...    27   8.2  
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for...    27   8.2  
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei...    27   8.2  
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei...    27   8.2  

>AL110500-11|CAB54493.1|  210|Caenorhabditis elegans Hypothetical
           protein Y87G2A.10 protein.
          Length = 210

 Score =  110 bits (264), Expect = 9e-25
 Identities = 55/106 (51%), Positives = 70/106 (66%)
 Frame = +1

Query: 214 KHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALER 393
           +HLEK + RD V A EY + C +L+ QYKV  + V      +IE F  KYRL CPAA+ER
Sbjct: 38  EHLEKMFSRDHVSADEYKSECFKLIDQYKVTMRLVHGAT--SIEDFAKKYRLHCPAAIER 95

Query: 394 IRENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQP 531
           IRE +P  +KDD+GN  K+IA IV  FIT +D LRL  RA+D + P
Sbjct: 96  IREGRPITVKDDQGNVLKHIASIVEQFITFLDALRLNTRAVDDLYP 141


>Z73973-1|CAA98266.1|  357|Caenorhabditis elegans Hypothetical
           protein F25D1.2 protein.
          Length = 357

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -3

Query: 348 SFNIGKLISLYLFESHFV-LHEETTACRRVFLCSHTITHVCLLQVFSRSRAFLYNLISSY 172
           +F IGK I+      H V LHEE   C R+ L    I+    + +F  + +F+   +  Y
Sbjct: 38  AFPIGKFIATCFLSFHEVKLHEELDKCARLLLLGAIIS---AIPIFQTTCSFVGRFVMGY 94

Query: 171 NSG 163
           ++G
Sbjct: 95  SAG 97


>Z77661-8|CAB01189.1|  438|Caenorhabditis elegans Hypothetical
           protein F40G12.10 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +1

Query: 244 CVRAQEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRE 402
           C     Y A  +       +A +++QA E PNI+      R   PAA+E + +
Sbjct: 336 CAIVSNYGAGRAGSFFVAVLAIEKLQAGEAPNIKEIALSVRSQRPAAIETLSQ 388


>Z99281-55|CAN99710.1|   74|Caenorhabditis elegans Hypothetical
           protein Y57G11C.12a protein.
          Length = 74

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 307 FKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIK 423
           F+Q+ AD   NI  F++ + L C   L  +  +K NL++
Sbjct: 20  FEQIIADNIKNIANFLSSFELSCRTKLATL-SDKLNLLE 57


>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
            protein.
          Length = 4280

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 295  YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL 417
            YK+ ++Q+ +D++  +E  +    L CP    R   N   L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189


>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
            protein.
          Length = 4450

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 295  YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL 417
            YK+ ++Q+ +D++  +E  +    L CP    R   N   L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189


>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
            805, isoform b protein.
          Length = 4450

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 295  YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL 417
            YK+ ++Q+ +D++  +E  +    L CP    R   N   L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189


>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
            805, isoform a protein.
          Length = 4280

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +1

Query: 295  YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL 417
            YK+ ++Q+ +D++  +E  +    L CP    R   N   L
Sbjct: 2149 YKIRYQQIPSDDWKEVEKGIKDPLLQCPGESPRFCYNATGL 2189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,423,696
Number of Sequences: 27780
Number of extensions: 283709
Number of successful extensions: 745
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)