Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o21
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   5.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    20   9.9  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   9.9  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = -1

Query: 414 HHTFINRSKFANNFYFY*SLLRSSNKISYTYSSEIYLACMFRSNKLCTCTVRVRVGN 244
           +HTF      A++  F  + LR   + +YT    + L   F +N   T   R+ + +
Sbjct: 202 NHTFYPWMAIADSMTFGANGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAH 258


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 246 FLRGPVQCRCKVCLNE 293
           FLR    CRCK   NE
Sbjct: 170 FLRQVFTCRCKDYKNE 185


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +3

Query: 192  ELRPDCWYKRIPKIFRTRFLRGPVQCRCKVCLNETYKLNK 311
            +L+ + W +    IF +      V C C VC +   +++K
Sbjct: 899  QLQENDWLQLGYLIFVSTLYTANVVCICHVCYSTIQEVSK 938


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 64  HELNFVFNFCLQYFIF 17
           HE N + N  +Q+F++
Sbjct: 127 HETNLLRNVSVQFFVY 142


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 64  HELNFVFNFCLQYFIF 17
           HE N + N  +Q+F++
Sbjct: 127 HETNLLRNVSVQFFVY 142


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 339 KISYTYSSEIYLACMF 292
           KISY  S ++YL   F
Sbjct: 123 KISYVKSIDVYLGTCF 138


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 408 TFINRSKFANNFYF 367
           ++I  + F NNFYF
Sbjct: 286 SYIILTSFLNNFYF 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,251
Number of Sequences: 336
Number of extensions: 1907
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)