Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o20
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical ...   158   4e-39
AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical...   158   4e-39
Z49131-5|CAA88978.1|  217|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF040648-3|AAL06034.2|  453|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF040648-1|AAK21412.1|  519|Caenorhabditis elegans Hypothetical ...    28   5.0  
AB007816-1|BAA28352.1|  394|Caenorhabditis elegans matrix metall...    28   5.0  
AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    27   8.8  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    27   8.8  

>AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  158 bits (383), Expect = 4e-39
 Identities = 72/131 (54%), Positives = 93/131 (70%)
 Frame = +1

Query: 169 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 348
           L SSN+ F G Q VY HASS  +C+M F +Y+P      D KLP L+YLSGLTC+  NF+
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62

Query: 349 TKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGS 528
            KSGFQ++A++H ++VV PDTSPRGV +DGD  SWDFG  AGFY++AT E W  NYRM  
Sbjct: 63  EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYD 122

Query: 529 YLNVELYDLIL 561
           Y+  EL + ++
Sbjct: 123 YIVKELLEEVV 133


>AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  158 bits (383), Expect = 4e-39
 Identities = 72/131 (54%), Positives = 93/131 (70%)
 Frame = +1

Query: 169 LESSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 348
           L SSN+ F G Q VY HASS  +C+M F +Y+P      D KLP L+YLSGLTC+  NF+
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62

Query: 349 TKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGS 528
            KSGFQ++A++H ++VV PDTSPRGV +DGD  SWDFG  AGFY++AT E W  NYRM  
Sbjct: 63  EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYD 122

Query: 529 YLNVELYDLIL 561
           Y+  EL + ++
Sbjct: 123 YIVKELLEEVV 133


>Z49131-5|CAA88978.1|  217|Caenorhabditis elegans Hypothetical
           protein ZC373.6 protein.
          Length = 217

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +1

Query: 418 RGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNR 594
           +G+ I G    +   +S G+   +T +P+N N+       V++ D  +  F  V+ P R
Sbjct: 159 QGLDIHGGSGGYHRALSGGYLPPSTYDPYNVNWHSYGDEGVKMKDKAISVFRRVIAPGR 217


>Z81592-5|CAB04727.1|  434|Caenorhabditis elegans Hypothetical
           protein T16G1.5 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 155 WTACN*NRPIKFLVVIKKCILMHHL 229
           WT  N N P K ++ +  CI +HHL
Sbjct: 65  WTIPNENLPEKIILKLTSCINVHHL 89


>Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical
           protein F35H8.1 protein.
          Length = 150

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +1

Query: 310 YLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDA 489
           YLS L C    FI   G +R A E   +++  +   + + +D  ++   F VS  F  D 
Sbjct: 3   YLSNLLCLTLTFIVCFGAERDADEEAYVLM--NLLKQSIDMDQTEALPGF-VSRDFTYDT 59

Query: 490 TNEPWNNNYRMGSYLNV 540
               WN +  M  YL V
Sbjct: 60  CKGIWNRDKYM-EYLKV 75


>AF040648-3|AAL06034.2|  453|Caenorhabditis elegans Hypothetical
           protein H19M22.3c protein.
          Length = 453

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 517 CNYYSMVHLWRLNKNRH 467
           CN+ + +H+WR N N H
Sbjct: 373 CNFLAGLHMWRTNPNHH 389


>AF040648-1|AAK21412.1|  519|Caenorhabditis elegans Hypothetical
           protein H19M22.3a protein.
          Length = 519

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 517 CNYYSMVHLWRLNKNRH 467
           CN+ + +H+WR N N H
Sbjct: 439 CNFLAGLHMWRTNPNHH 455


>AB007816-1|BAA28352.1|  394|Caenorhabditis elegans matrix
           metalloproteinase protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 517 CNYYSMVHLWRLNKNRH 467
           CN+ + +H+WR N N H
Sbjct: 314 CNFLAGLHMWRTNPNHH 330


>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  CRGK*WLQDNCEYNFSGGSSEIKH-GQLAIRIVQ*NFWWLS-KSVFS 218
           C  +  + DN +  +SGG+ E+ H  +L   IV  + +WL  K  FS
Sbjct: 92  CSNQAMISDNWKPEYSGGTQELAHPDELPQTIVNDDDFWLKPKDFFS 138


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  CRGK*WLQDNCEYNFSGGSSEIKH-GQLAIRIVQ*NFWWLS-KSVFS 218
           C  +  + DN +  +SGG+ E+ H  +L   IV  + +WL  K  FS
Sbjct: 133 CSNQAMISDNWKPEYSGGTQELAHPDELPQTIVNDDDFWLKPKDFFS 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,726,048
Number of Sequences: 27780
Number of extensions: 352052
Number of successful extensions: 837
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)