Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o19
         (580 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214...    30   1.2  
12_02_0723 - 22532379-22532902,22533060-22533135,22533195-225333...    27   8.2  
12_02_0722 - 22521909-22521932,22522291-22522419,22522976-225242...    27   8.2  
12_02_0534 - 20103908-20105897,20106314-20107116                       27   8.2  
07_03_1773 - 29422660-29422806,29423103-29423201,29423811-294239...    27   8.2  

>11_06_0553 -
           24920428-24921057,24921149-24921276,24921372-24921409,
           24921522-24921734,24921906-24921998,24922089-24922276,
           24922396-24922502,24922614-24922775,24922870-24922953,
           24923060-24923168,24923340-24923468,24923504-24923556,
           24923654-24923759,24924082-24924189
          Length = 715

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 148 NGDLHNNHDRGYGELDQEHGVLEDRHKLQDHRR 246
           NG +  NHD+    L +E   L  R +  DHRR
Sbjct: 153 NGGIMLNHDKDISALQEEISALRSRQRHLDHRR 185


>12_02_0723 -
           22532379-22532902,22533060-22533135,22533195-22533380,
           22533459-22534323,22534740-22534918,22535168-22535542
          Length = 734

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 120 NEPVLSSKRHKNVFGAIRSNHILFGLLK 37
           +EP  S K+  N+F   ++NH + G++K
Sbjct: 90  HEPATSFKKVTNLFNKFKTNHQIHGVMK 117


>12_02_0722 -
           22521909-22521932,22522291-22522419,22522976-22524242,
           22524659-22525461
          Length = 740

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 120 NEPVLSSKRHKNVFGAIRSNHILFGLLK 37
           +EP  S K+  N+F   ++NH + G++K
Sbjct: 90  HEPATSFKKVTNLFNKFKTNHQIHGVIK 117


>12_02_0534 - 20103908-20105897,20106314-20107116
          Length = 930

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 120 NEPVLSSKRHKNVFGAIRSNHILFGLLK 37
           +EP  S K+  N+F   ++NH + G++K
Sbjct: 90  HEPATSFKKVTNLFNKFKTNHQIHGVMK 117


>07_03_1773 -
           29422660-29422806,29423103-29423201,29423811-29423915,
           29423990-29424136,29424436-29424954
          Length = 338

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 157 LHNNHDRGYGELDQEHGVLEDRHKLQDHRRSVLFVHVVCPFVAD 288
           L  +HD+GY +L +      DR   +D      FVH +   +A+
Sbjct: 74  LRVDHDKGYIDLSKRRVSHHDRRTCEDRYSKSKFVHSIMRHLAE 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,554,349
Number of Sequences: 37544
Number of extensions: 293179
Number of successful extensions: 823
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)