BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8o19
(580 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 23 5.4
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 23 5.4
AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding pr... 23 5.4
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 23 7.2
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 23 9.5
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.4 bits (48), Expect = 5.4
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -1
Query: 547 DSDRFRFVSLCFLVTY 500
++DR+ FV+ CF +T+
Sbjct: 475 EADRYNFVTECFFMTH 490
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 23.4 bits (48), Expect = 5.4
Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 118 IILWHIIDKCNGD-LHNNHDRGYGELDQEHGVLEDRHKLQ 234
++LW I +CN D +++ + + ++ Q +E+ K++
Sbjct: 260 LVLWEIARRCNVDGVYDEYQLPFYDVVQPDPTIEEMRKVR 299
>AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding
protein AgamOBP18 protein.
Length = 151
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 203 TECSKTVTSYRITAGVYCL 259
T S TVT + GVYCL
Sbjct: 2 TSTSNTVTWVVVAVGVYCL 20
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 394 QTDLYEKQTANLGQPHGRQYRP 329
Q +++ Q ++ Q HG Q+RP
Sbjct: 215 QQSVHQPQQSSRDQQHGAQHRP 236
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 22.6 bits (46), Expect = 9.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 127 WHIIDKCNGDLHNNHDRGYGELDQEHG 207
+ + D+ GD+ N H+ +G D+ HG
Sbjct: 88 YSVHDEHTGDIKNQHETRHG--DEVHG 112
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,154
Number of Sequences: 2352
Number of extensions: 12784
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -