Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o09
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36753-9|CAA85337.1|  445|Caenorhabditis elegans Hypothetical pr...   187   5e-48
Z74033-7|CAA98472.2|  325|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AC025716-16|AAK39609.2|  917|Caenorhabditis elegans Hypothetical...    29   2.8  
Z32682-6|CAA83614.1|  200|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC006730-1|AAK72090.1|  324|Caenorhabditis elegans Serpentine re...    28   6.6  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL117203-15|CAD57713.2|  670|Caenorhabditis elegans Hypothetical...    27   8.7  
AL117203-14|CAD57712.2|  587|Caenorhabditis elegans Hypothetical...    27   8.7  
AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z36753-9|CAA85337.1|  445|Caenorhabditis elegans Hypothetical
           protein T09A5.11 protein.
          Length = 445

 Score =  187 bits (456), Expect = 5e-48
 Identities = 90/130 (69%), Positives = 100/130 (76%)
 Frame = +1

Query: 1   ITDTVVYRIEIEELKNGKWQPFEANDVQLEFVRIDPFIRTTLQKKPNGVYEAVFKVPDVW 180
           IT+ VVY IEIEELKNGKW PF+  DVQLEFVRIDPF+R TL K  NG     FK+PDV 
Sbjct: 305 ITEDVVYTIEIEELKNGKWVPFQGKDVQLEFVRIDPFVRATL-KNSNGRLSVAFKLPDVL 363

Query: 181 GVYQFKVDYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFLFSFV 360
           GV++F VDY RVGYT LY   QVSVRPL HTQYERFI SAYPYY SSFSMM G+ LFS V
Sbjct: 364 GVFKFLVDYRRVGYTHLYDVQQVSVRPLWHTQYERFIRSAYPYYASSFSMMAGLVLFSIV 423

Query: 361 FLYYKEDQPK 390
           +LY+K+   K
Sbjct: 424 YLYHKDTPVK 433


>Z74033-7|CAA98472.2|  325|Caenorhabditis elegans Hypothetical
           protein F38B7.4 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +1

Query: 331 MIGVFLFSFVFLYYKEDQPKTKSE*MKC*FVCNVYLMLNILSQ*VMYIGHITFSF 495
           +I V  F+ +F +YK +Q KT  E  K     N+YL +  + Q  +Y+  I+F+F
Sbjct: 204 VINVATFAKIFKFYK-NQNKTDKESRKR-IKKNIYLFIQTVLQDSLYLIDISFTF 256


>AC025716-16|AAK39609.2|  917|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.5 protein.
          Length = 917

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
 Frame = +1

Query: 25  IEIEELKNGKWQPFEAN---DVQL-EFVRIDPFIRTTLQKKPNGVYEAVFKVPDVWGVYQ 192
           IEI   K+  + P +A    D+ L    RI P   + LQ     V+EA+  + D     +
Sbjct: 579 IEISRNKSHIFHPLDAKLVLDILLIASERILPLTSSALQHPCQAVWEAIQNLVD----QE 634

Query: 193 FK-VDYDRVGYTRLYHSTQVSVRP 261
           F  +DYD++G + +  + +V +RP
Sbjct: 635 FDWLDYDQIGTSAMRFALEVYLRP 658


>Z32682-6|CAA83614.1|  200|Caenorhabditis elegans Hypothetical
           protein M04D8.6 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 286 FIPSAYPYYVSSFSMMIGVFLFSFV 360
           +IP  YPY+++ F + I   LF+ V
Sbjct: 51  YIPKYYPYFLNQFLLTIAFALFNIV 75


>AC006730-1|AAK72090.1|  324|Caenorhabditis elegans Serpentine
           receptor, class i protein33 protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 271 TQYERFIPSAYPYYVSSFSMMIGVFLFSF 357
           T+ E+FI S YP Y+S F  +    ++ F
Sbjct: 156 TRREKFIESRYPKYLSEFKNLSNFAIYQF 184


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -1

Query: 572 LSYYTKIFRFI*HHSILLSDL*IFKTKLNVIWPMYITY*LKMFNIKYTLHTNQHFI 405
           L +Y  +F FI    + +S   +  +    +WPM+I     +  + +TL+T  HF+
Sbjct: 333 LVFYNTLFFFISLFPLGVSRTLLLLSSTEFLWPMFIDL-ESIVLVIFTLNTMSHFV 387


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -1

Query: 572 LSYYTKIFRFI*HHSILLSDL*IFKTKLNVIWPMYITY*LKMFNIKYTLHTNQHFI 405
           L +Y  +F FI    + +S   +  +    +WPM+I     +  + +TL+T  HF+
Sbjct: 266 LVFYNTLFFFISLFPLGVSRTLLLLSSTEFLWPMFIDL-ESIVLVIFTLNTMSHFV 320


>AL117203-15|CAD57713.2|  670|Caenorhabditis elegans Hypothetical
           protein Y48C3A.5b protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 277 IVCVVVGGLTPVLSDKVLYTRPC---RNPL*TDKHP 179
           +VC VVGGL  V+S   LY R C   RNP+ T  +P
Sbjct: 59  LVCGVVGGLIVVISVVYLY-RYCLKRRNPVTTTVNP 93


>AL117203-14|CAD57712.2|  587|Caenorhabditis elegans Hypothetical
           protein Y48C3A.5a protein.
          Length = 587

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 277 IVCVVVGGLTPVLSDKVLYTRPC---RNPL*TDKHP 179
           +VC VVGGL  V+S   LY R C   RNP+ T  +P
Sbjct: 59  LVCGVVGGLIVVISVVYLY-RYCLKRRNPVTTTVNP 93


>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +1

Query: 202 DYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFL 348
           D   +  ++ Y +T   VRP+    Y R     Y Y +  + M + +F+
Sbjct: 246 DKSIINRSQYYDATSRQVRPIHMETYIRLSSQFYGYLIGLWIMFLSIFV 294


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +1

Query: 202 DYDRVGYTRLYHSTQVSVRPLQHTQYERFIPSAYPYYVSSFSMMIGVFL 348
           D   +  ++ Y +T   VRP+    Y R     Y Y +  + M + +F+
Sbjct: 246 DKSIINRSQYYDATSRQVRPIHMETYIRLSSQFYGYLIGLWIMFLSIFV 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,354,597
Number of Sequences: 27780
Number of extensions: 295051
Number of successful extensions: 731
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)