Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o08
         (165 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    20   2.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   2.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   2.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    20   2.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    20   2.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    19   4.7  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 91  GINDDIIPVITSRTTDVIN 35
           G+NDD   +I    TD+ N
Sbjct: 59  GLNDDGSLLILDNATDITN 77


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +1

Query: 79  HRLCPIFGVLP 111
           +++C IFG++P
Sbjct: 18  YKICNIFGIVP 28


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +1

Query: 79  HRLCPIFGVLP 111
           +++C IFG++P
Sbjct: 18  YKICNIFGIVP 28


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 71  SSNHFKNYRCNQCRLSAVS 15
           S    K ++C QC   A++
Sbjct: 195 SHGKIKTFKCKQCDFVAIT 213



 Score = 19.0 bits (37), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 89  HKR*HYSSNHFKNYRCNQCRLSAVS 15
           H R H  S   K ++CN+C  + V+
Sbjct: 249 HLRNHAGS---KPFQCNKCDYTCVN 270


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 26  KVYIDYICSS*SDYWNNVIVYARFLEFYHYQXD 124
           ++Y + + +   DYWN    Y   + +Y+Y  D
Sbjct: 330 EIYDNALLALLDDYWNE---YIPPILYYNYTVD 359


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 26  KVYIDYICSS*SDYWNNVIVYARFLEFYHYQXD 124
           ++Y + + +   DYWN    Y   + +Y+Y  D
Sbjct: 330 EIYDNALLALLDDYWNE---YIPPILYYNYTVD 359


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
          protein.
          Length = 69

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 89 HKR*HYSSNHFKNYRCNQCRLSAVS 15
          H R H  S   K ++CN+C  + V+
Sbjct: 7  HLRNHAGS---KPFQCNKCDYTCVN 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,980
Number of Sequences: 336
Number of extensions: 574
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 34
effective length of database: 111,161
effective search space used:  2223220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)