Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o08
         (165 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   2.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    19   4.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    19   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   5.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   7.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    18   9.7  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    18   9.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                18   9.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 62  DYWNNVIVY 88
           DYWN VI Y
Sbjct: 529 DYWNCVIQY 537


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  EVITGIMSSFMPDFWSF 107
           EV+TG++   MP +  F
Sbjct: 518 EVVTGVIGHRMPRYCLF 534


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 57  EVITGIMSSFMPDFWSF 107
           EV+TG++   MP +  F
Sbjct: 518 EVVTGVIGHRMPRYCLF 534


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 158 HHHYTTH 138
           HHH +TH
Sbjct: 815 HHHQSTH 821


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 23  QKVYIDYICSS*SDYWNNVIVYARFLE 103
           +++  DY+C S  +  N+++  A   E
Sbjct: 615 EEITFDYMCQSSKNSENSIMQRASMKE 641


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -2

Query: 161 PHHHYTTHRXS 129
           PHHH   H  S
Sbjct: 414 PHHHTMGHGHS 424


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 18  YGRKSTLITSVVLEVITGIMSSFMPDFWSFTI 113
           Y R ST+   +  ++  G +  F+   W++TI
Sbjct: 143 YDRYSTIARPLDGKLSRGQVILFIVLIWTYTI 174


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -1

Query: 156 PPLYHPQR 133
           PP YHP +
Sbjct: 313 PPSYHPHQ 320


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,515
Number of Sequences: 438
Number of extensions: 625
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 34
effective length of database: 131,451
effective search space used:  2629020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)