Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8o07
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    25   0.69 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.91 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.4  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 245 NRPVYSITSYVTNLQNSFCYPQNVKRSEYRQMKHER 352
           ++PV S T+  TN  N++ Y  N+       M H +
Sbjct: 239 SQPVLSTTNSTTNCYNNYPYYSNMDYLSSSTMSHSQ 274


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 233 HLGINRPVYSITSYVTNLQNSFCYPQNVKRS 325
           H G+N PV  + S + N Q     P N   S
Sbjct: 402 HCGVNVPVPPMQSQIINPQPQITSPSNTNTS 432


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 113 HFISHNKQ 90
           HF+SHNKQ
Sbjct: 86  HFLSHNKQ 93


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 517 YFDHQPFNRVLKQYQFRYAFYVFR-FLLFV 431
           Y+ +  F  +L  Y F YAF +F   LLF+
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHLLFL 130


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -2

Query: 490 VLKQYQFRYAFYVFRFLLFVSEKEILWETFKKFRYLR 380
           + K + F +      F++FV+ +   W +F K   L+
Sbjct: 525 ICKNFCFGFITKQLIFMIFVTYQLYCWSSFLKISVLQ 561


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,671
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)