Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n23
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...   164   4e-41
Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    62   2e-10
U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical pr...    30   0.91 
Z81513-1|CAB04174.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc seven...    29   2.8  
U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc seven...    29   2.8  
U40802-10|AAK19008.2|  374|Caenorhabditis elegans Hypothetical p...    27   6.4  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    27   6.4  
Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U80030-8|AAG24166.2|  375|Caenorhabditis elegans Serpentine rece...    27   8.5  

>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score =  164 bits (398), Expect = 4e-41
 Identities = 70/131 (53%), Positives = 95/131 (72%)
 Frame = +1

Query: 142 LDRIRRDITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVW 321
           ++ +++ +TS  W TYR+ F PIG  G ++D+GWGCMLRC QM+LG  L+R H+   + W
Sbjct: 50  IEAMKKYVTSRFWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEW 109

Query: 322 SPETRDPTYLKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLKKLTVYD 501
             E     Y KI+Q F + K A YSIHQ+A MG +EGKEV +WFGPNT AQV+KKLT++D
Sbjct: 110 DIEKTSEIYEKILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMKKLTIFD 169

Query: 502 KWSSLAIHVAL 534
            WS++A+HVAL
Sbjct: 170 DWSNIAVHVAL 180


>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
 Frame = +1

Query: 160 DITSIIWCTYRKGFVPIGDEGLTSDKGWGCMLRCGQMVLGVALVRVHLSVDWVWSPETR- 336
           D  S +W TYR  F  + D   T+D GWGCM+R  QM++  A++      DW ++   R 
Sbjct: 174 DYYSRLWITYRTDFPALLDTDTTTDCGWGCMIRTTQMMVAQAIMVNRFGRDWRFTRRKRS 233

Query: 337 -----------DPTYLK---IIQRFEERKQAPYSIHQ---VALMGASEGKEVGQWFGPNT 465
                      D   ++   I++ FE++  AP  IH+   +A MG  + K VG W+ P+ 
Sbjct: 234 HVAAHGDEDDFDREKIQEWMILKLFEDKPTAPLGIHKMVGIAAMGKGK-KAVGSWYSPSE 292

Query: 466 IAQVLKK 486
              ++KK
Sbjct: 293 AVFIMKK 299


>U23514-7|AAC46539.3|  493|Caenorhabditis elegans Hypothetical
           protein F48E8.3 protein.
          Length = 493

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 21/58 (36%), Positives = 25/58 (43%)
 Frame = -3

Query: 305 DKCTLTRATPNTICPHRNIQPHPLSEVKPSSPIGTKPFLYVHHIIDVISLLIRSKLQQ 132
           D   + RA    I    NIQ HP + V P  P     FL    I    +LLI SK Q+
Sbjct: 237 DGVKIARALGAKIIGMENIQIHPTAFVDPKDPSAGTKFLAAEAIRGKGALLINSKGQR 294


>Z81513-1|CAB04174.1|  346|Caenorhabditis elegans Hypothetical
           protein F26D2.1 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 3   FLRSIHSRCVSYSNSYHVFYLNIFYCFNIFPYY 101
           FL S  S C S++ ++ V YL +FY   +F  Y
Sbjct: 8   FLISKLSFCASFTLNFFVIYLTLFYIERVFETY 40


>U40412-4|AAV28342.1|  618|Caenorhabditis elegans Hypothetical
           protein F46G11.1 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 57  FYLNIFYCFNIFPYY 101
           ++LNIF+CF + PYY
Sbjct: 601 YFLNIFFCFFLSPYY 615


>U88178-3|AAC24414.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 3 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 465 CIRSKPLANFFSFRGTHQCHLMDRI 391
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>U88169-1|AAB42233.1|  305|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 4 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 465 CIRSKPLANFFSFRGTHQCHLMDRI 391
           C + K   NFF  RG H+C  ++R+
Sbjct: 107 CFKIKYPENFFMLRGNHECPAINRV 131


>U40802-10|AAK19008.2|  374|Caenorhabditis elegans Hypothetical
           protein ZC477.2 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 26  MCILFQFISCFLSKYILL 79
           +C+LF F  CF  KYILL
Sbjct: 141 ICLLFAFKICFPQKYILL 158


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 257 RNIQPHPLSEVKPSSPIGTKPFLYVHHIIDVISLLIRSKLQQQSLCTLIAPNV 99
           R++  HPL   +PS P+     L  H +I +   L +++L+ Q    LI P +
Sbjct: 467 RSLPAHPLILPRPSLPLNQLRSLPAHPLILLQPSLPQNQLRSQPAHPLILPRL 519


>Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 349 LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLKKLTVYDKWSSLAIHV 528
           L ++   E  +  P S    AL+     K V  W   NTI  +++++T Y    S++  V
Sbjct: 356 LSVVTSEEAEELKPLSRAMCALIQCRNLKHVLPW-SKNTIFNLMEEITTYPNPWSMSTFV 414

Query: 529 AL 534
           AL
Sbjct: 415 AL 416


>Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 349 LKIIQRFEERKQAPYSIHQVALMGASEGKEVGQWFGPNTIAQVLKKLTVYDKWSSLAIHV 528
           L ++   E  +  P S    AL+     K V  W   NTI  +++++T Y    S++  V
Sbjct: 356 LSVVTSEEAEELKPLSRAMCALIQCRNLKHVLPW-SKNTIFNLMEEITTYPNPWSMSTFV 414

Query: 529 AL 534
           AL
Sbjct: 415 AL 416


>U80030-8|AAG24166.2|  375|Caenorhabditis elegans Serpentine
           receptor, class w protein112 protein.
          Length = 375

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 197 ALYQLVMKV*LLIKDGAVCYDVDRWY*VLLLSEYTYLLTGY 319
           A+Y + +K+ L++ D   CY  + ++ +++L    Y L  Y
Sbjct: 83  AIYNIHLKIVLILTDIYPCYSKNLYHNLIILDNCLYCLQDY 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,137,906
Number of Sequences: 27780
Number of extensions: 291570
Number of successful extensions: 826
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)