Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8n20
(605 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.1
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 7.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.4
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 9.4
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN 105
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 241 SKDSLLNEMPFNIPGNKFNKHN 306
+ +SL N +N N +NKHN
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHN 338
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 317 YKYRLCLLNLFPGILKGISFNRLSF 243
Y+Y L + N ++ G FN ++F
Sbjct: 373 YEYVLAVSNRIQKVIYGFDFNDVNF 397
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 322 VKNNDD*ENLTNNKNVI 372
V+ N +NLTN NVI
Sbjct: 23 VRENSSGKNLTNTLNVI 39
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 206 SVSTMLGLPSIRCLIF 159
SV L +PS+ C++F
Sbjct: 127 SVGIDLEMPSVECIVF 142
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.4
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = +1
Query: 166 RQRIEGNPNMVDTEKNWPMLLAKYQSKDSLLN--EMPFNIPGNK---FNKHNRYL*FVKN 330
++ I+G P + KNW + ++ +L+N ++ N+ R + F N
Sbjct: 252 KKEIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEEFERNRLQLLESFKRKVNFYPN 311
Query: 331 NDD*ENLTN 357
N D E N
Sbjct: 312 NQDIEKFLN 320
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +1
Query: 94 VLPHKLRYLENMLNSEVVAKATKIRQRIEGNPNMV 198
+ H+ R + NM+ + K TKI + N +
Sbjct: 379 ICEHRWRQIYNMVRFRNLVKGTKIDNWWDNGSNQI 413
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,013
Number of Sequences: 438
Number of extensions: 2833
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -