Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n18
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.2  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = -1

Query: 321 SSAPSTPGGIPLGICPDDEPSLLFPFIICQLGNINFFSIHM*NIYD 184
           S++PS PGG      P    S         LG+ N+  I    ++D
Sbjct: 78  STSPSYPGGGSSSPSPSSPSSFFSSVSPTSLGSENYTGISDLFVFD 123


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 276 GISPTEYLLECWGQKNHRIEE 338
           GIS +   L CW Q  + +E+
Sbjct: 231 GISISGTALNCWTQTENSLEK 251


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 276 GISPTEYLLECWGQKNHRIEE 338
           GIS +   L CW Q  + +E+
Sbjct: 102 GISISGTALNCWTQTENSLEK 122


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -1

Query: 318 SAPSTPGGIPLGICPDDEPSLLFPFIICQLG 226
           S P  PGG+P  +      S+     + +LG
Sbjct: 397 SPPRGPGGVPTSVIQAATSSVSDDLYLLELG 427


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -2

Query: 161 INELSQNVLCKYFVTLVVL*VRFHPVLDPSVLGDHTPSK 45
           I+  SQ ++C   V + +L      ++DP+    H P++
Sbjct: 763 ISPRSQLIICSGLVFVQILINGVWMIIDPAKAMHHYPTR 801


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 276 GISPTEYLLECWGQKNHRIEE 338
           GIS +   L CW Q  + +E+
Sbjct: 231 GISISGTALNCWTQTENSLEK 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,812
Number of Sequences: 438
Number of extensions: 3141
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)