Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n16
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.24 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.74 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 491 DETPTHSLLAICENETTKYPTYCSSQH 571
           D  P   L AIC+++   Y  YC  +H
Sbjct: 421 DSNPCKHLDAICQDKLGDYACYCPPKH 447


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +2

Query: 230 LYYF---AVGLTCIYAAFFVIILADLQFYWSLDGLQQKIDYYSNLVR 361
           +YYF    + L CIY      I+    FY +      K  +Y N+VR
Sbjct: 285 IYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVR 331


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 558  QYVGYFVVSFSQMASKECVGVSSIDK 481
            Q++GYF+   + + S+ CV + S+ K
Sbjct: 1241 QFLGYFIGLITFVMSQHCVELVSMIK 1266


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 458 FPYFGDFFSVAFQFFPV 408
           FPY G     A  FFPV
Sbjct: 216 FPYRGVMIDTARNFFPV 232


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 388 PAEISIYTGKN*KATEKKSPKYGNYHRIKRN 480
           P + S   G++ ++  K+ PK G   + +RN
Sbjct: 200 PRQYSQSRGRHNQSRSKRQPKTGREDQTRRN 230


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 172 LELPRPPRRLSILFIDRSKTLLLRC 246
           LE P P  R S L  + S  L L C
Sbjct: 228 LESPNPASRSSCLGSNTSSMLSLNC 252


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 172 LELPRPPRRLSILFIDRSKTLLLRC 246
           LE P P  R S L  + S  L L C
Sbjct: 17  LESPNPASRSSCLGSNTSSMLSLNC 41


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 172 LELPRPPRRLSILFIDRSKTLLLRC 246
           LE P P  R S L  + S  L L C
Sbjct: 17  LESPNPASRSSCLGSNTSSMLSLNC 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,456
Number of Sequences: 336
Number of extensions: 3812
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)