Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8n14
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 199 4e-50
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 179 6e-44
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 166 4e-40
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 162 6e-39
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 146 3e-34
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 137 2e-31
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 133 4e-30
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 122 1e-26
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 109 7e-23
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 108 1e-22
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 108 1e-22
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 106 5e-22
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 7e-22
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 105 1e-21
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 103 4e-21
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 101 1e-20
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 101 2e-20
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 99 5e-20
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 98 1e-19
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 97 3e-19
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 97 4e-19
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 97 4e-19
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 95 1e-18
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 95 1e-18
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 92 1e-17
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 92 1e-17
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 91 2e-17
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 91 2e-17
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 91 2e-17
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 91 2e-17
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 91 3e-17
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 90 5e-17
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 90 5e-17
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 89 6e-17
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 89 6e-17
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 89 9e-17
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 89 9e-17
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 89 1e-16
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 89 1e-16
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 89 1e-16
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 88 1e-16
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 88 2e-16
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 88 2e-16
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 88 2e-16
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 87 3e-16
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 87 3e-16
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 87 5e-16
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 87 5e-16
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 87 5e-16
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 87 5e-16
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 87 5e-16
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 86 6e-16
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 86 6e-16
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 6e-16
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 85 1e-15
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 85 1e-15
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 85 1e-15
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 85 1e-15
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 85 1e-15
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 85 1e-15
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 85 2e-15
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 85 2e-15
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 85 2e-15
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 84 2e-15
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 84 2e-15
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 83 4e-15
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 83 4e-15
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 83 6e-15
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 83 6e-15
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 83 6e-15
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 83 6e-15
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 83 7e-15
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 83 7e-15
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 83 7e-15
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 82 1e-14
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 82 1e-14
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 82 1e-14
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 82 1e-14
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 81 2e-14
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 81 2e-14
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 81 2e-14
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 81 2e-14
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 81 2e-14
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 81 3e-14
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 81 3e-14
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 81 3e-14
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 81 3e-14
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 80 4e-14
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 80 4e-14
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 80 4e-14
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 80 4e-14
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 4e-14
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 80 4e-14
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 80 4e-14
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 80 4e-14
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 80 5e-14
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 80 5e-14
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 80 5e-14
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 80 5e-14
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 80 5e-14
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 79 7e-14
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 79 7e-14
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 79 7e-14
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 79 7e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 79 7e-14
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 79 9e-14
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 79 9e-14
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 79 1e-13
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 79 1e-13
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 78 2e-13
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 78 2e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 78 2e-13
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 2e-13
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 78 2e-13
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 78 2e-13
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 78 2e-13
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 78 2e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 78 2e-13
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 78 2e-13
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 78 2e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 78 2e-13
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 78 2e-13
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 78 2e-13
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 78 2e-13
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 77 4e-13
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 77 4e-13
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 77 4e-13
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 77 4e-13
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 77 4e-13
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 77 4e-13
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 77 4e-13
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 77 4e-13
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 77 4e-13
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 77 4e-13
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 77 5e-13
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 77 5e-13
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 77 5e-13
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 77 5e-13
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 76 6e-13
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 76 6e-13
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 76 6e-13
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 76 6e-13
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 76 6e-13
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 76 9e-13
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 76 9e-13
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 75 1e-12
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 75 1e-12
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 75 1e-12
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 1e-12
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 75 1e-12
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 75 1e-12
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 75 1e-12
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 75 1e-12
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 75 1e-12
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 75 1e-12
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 75 1e-12
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 75 1e-12
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 75 1e-12
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 75 1e-12
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 75 2e-12
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 75 2e-12
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 75 2e-12
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 75 2e-12
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 75 2e-12
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 74 3e-12
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 74 3e-12
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 74 3e-12
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 74 3e-12
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 74 3e-12
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 74 3e-12
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 74 3e-12
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 74 3e-12
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 74 3e-12
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 73 5e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 73 5e-12
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 5e-12
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 73 5e-12
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 73 5e-12
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 73 5e-12
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 73 5e-12
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 73 6e-12
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 73 6e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 73 6e-12
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 73 6e-12
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 73 8e-12
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 73 8e-12
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 73 8e-12
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 73 8e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 73 8e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 73 8e-12
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 73 8e-12
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 72 1e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 72 1e-11
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 1e-11
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 72 1e-11
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 72 1e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 72 1e-11
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 72 1e-11
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 72 1e-11
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 72 1e-11
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 72 1e-11
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 72 1e-11
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 72 1e-11
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 72 1e-11
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 72 1e-11
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 72 1e-11
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 71 2e-11
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 71 2e-11
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 71 2e-11
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 71 2e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 2e-11
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 71 2e-11
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 71 2e-11
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 71 2e-11
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 71 2e-11
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 71 3e-11
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 71 3e-11
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 71 3e-11
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 71 3e-11
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 71 3e-11
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 71 3e-11
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 71 3e-11
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 70 4e-11
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 70 4e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 70 4e-11
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 70 4e-11
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 70 4e-11
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 70 4e-11
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 70 6e-11
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 70 6e-11
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 70 6e-11
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 70 6e-11
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 6e-11
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 70 6e-11
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 70 6e-11
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 70 6e-11
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 70 6e-11
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 69 7e-11
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 69 7e-11
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 69 7e-11
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 7e-11
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 69 7e-11
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 7e-11
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 69 7e-11
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 69 7e-11
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 69 7e-11
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 69 1e-10
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 69 1e-10
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 69 1e-10
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 69 1e-10
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 69 1e-10
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 69 1e-10
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 69 1e-10
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 69 1e-10
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 69 1e-10
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 69 1e-10
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 69 1e-10
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 69 1e-10
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 69 1e-10
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 68 2e-10
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 68 2e-10
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 68 2e-10
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 68 2e-10
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 68 2e-10
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 68 2e-10
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 68 2e-10
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 68 2e-10
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 68 2e-10
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 68 2e-10
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 68 2e-10
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 3e-10
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 67 3e-10
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 67 3e-10
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 67 3e-10
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 67 3e-10
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 67 3e-10
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 67 4e-10
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 4e-10
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 67 4e-10
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 67 4e-10
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 67 4e-10
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 67 4e-10
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 67 4e-10
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 67 4e-10
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 66 5e-10
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 66 5e-10
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 5e-10
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 66 5e-10
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 66 5e-10
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 66 5e-10
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 66 5e-10
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 66 5e-10
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 7e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 66 7e-10
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 7e-10
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 66 7e-10
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 66 7e-10
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 66 7e-10
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 66 7e-10
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 66 7e-10
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 66 7e-10
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 9e-10
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 66 9e-10
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 66 9e-10
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 66 9e-10
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 66 9e-10
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 66 9e-10
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 66 9e-10
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 66 9e-10
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 66 9e-10
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 65 1e-09
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 65 1e-09
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 65 1e-09
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 65 1e-09
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 65 1e-09
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 65 1e-09
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 65 2e-09
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 2e-09
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 65 2e-09
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 65 2e-09
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 65 2e-09
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 65 2e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 65 2e-09
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 65 2e-09
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 64 2e-09
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 64 2e-09
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 64 2e-09
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 64 2e-09
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 64 2e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 64 2e-09
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 64 3e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 64 3e-09
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 64 3e-09
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 64 3e-09
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 64 3e-09
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 64 3e-09
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 64 3e-09
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 64 3e-09
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 64 4e-09
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 64 4e-09
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 64 4e-09
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 64 4e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 64 4e-09
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 63 5e-09
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 63 5e-09
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 63 5e-09
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 63 5e-09
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 63 5e-09
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 63 5e-09
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 63 5e-09
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 63 5e-09
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 63 5e-09
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 63 6e-09
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 63 6e-09
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 63 6e-09
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 63 6e-09
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 63 6e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 63 6e-09
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 62 9e-09
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 62 9e-09
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 9e-09
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 62 9e-09
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 62 9e-09
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 62 9e-09
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 62 9e-09
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 62 9e-09
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 62 9e-09
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 9e-09
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 62 9e-09
UniRef50_UPI00015B4CF1 Cluster: PREDICTED: similar to DEAD box A... 62 1e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 62 1e-08
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 62 1e-08
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 62 1e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 62 1e-08
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 62 1e-08
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 62 1e-08
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 62 1e-08
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 62 1e-08
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 62 1e-08
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 61 2e-08
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 61 2e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 61 2e-08
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 61 2e-08
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 61 2e-08
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 61 2e-08
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 2e-08
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 61 2e-08
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 61 2e-08
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 61 2e-08
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 61 2e-08
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 61 2e-08
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 2e-08
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 61 2e-08
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 61 2e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 61 3e-08
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 61 3e-08
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 61 3e-08
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 61 3e-08
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 61 3e-08
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 61 3e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 3e-08
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 60 3e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 3e-08
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 60 3e-08
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 60 3e-08
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 60 3e-08
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 60 3e-08
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 60 3e-08
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 60 3e-08
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 60 5e-08
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 60 5e-08
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 60 5e-08
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 5e-08
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 5e-08
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 60 5e-08
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 60 6e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 60 6e-08
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 60 6e-08
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 60 6e-08
UniRef50_Q4Q5M6 Cluster: ATP-dependent RNA helicase-like protein... 60 6e-08
UniRef50_A2FQ89 Cluster: Type III restriction enzyme, res subuni... 60 6e-08
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 60 6e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 60 6e-08
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 60 6e-08
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 51 8e-08
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 59 8e-08
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 59 8e-08
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 59 8e-08
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 59 8e-08
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 59 8e-08
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 59 8e-08
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 59 8e-08
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 59 8e-08
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 59 8e-08
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 59 8e-08
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 59 8e-08
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 59 8e-08
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 59 8e-08
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 59 8e-08
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 199 bits (486), Expect = 4e-50
Identities = 93/133 (69%), Positives = 114/133 (85%), Gaps = 2/133 (1%)
Frame = +2
Query: 254 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 427
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 428 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 607
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV+
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVI 121
Query: 608 IALGDHLNAKCHA 646
+ALGD++ A CHA
Sbjct: 122 LALGDYMGATCHA 134
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 179 bits (435), Expect = 6e-44
Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
Frame = +2
Query: 284 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 460
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G D
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHD 69
Query: 461 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 604
VIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 70 VIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 166 bits (404), Expect = 4e-40
Identities = 80/111 (72%), Positives = 95/111 (85%), Gaps = 1/111 (0%)
Frame = +2
Query: 263 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 439
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 440 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 592
PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 68 PCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 162 bits (394), Expect = 6e-39
Identities = 78/104 (75%), Positives = 90/104 (86%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+LQ +D +RE QALILAPTRELA QIQK ++ALGD++N +CHA
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHA 139
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 147 bits (355), Expect = 3e-34
Identities = 65/108 (60%), Positives = 88/108 (81%)
Frame = +2
Query: 320 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 499
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 500 TFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 643
F++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 329 MFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 137 bits (331), Expect = 2e-31
Identities = 64/106 (60%), Positives = 84/106 (79%)
Frame = +2
Query: 314 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 493
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 494 TATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
T TF+I LQ+ID + R+ Q +ILAP RELA+QI VV +G +LN
Sbjct: 107 TGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLN 152
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 133 bits (321), Expect = 4e-30
Identities = 64/92 (69%), Positives = 79/92 (85%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIA 613
LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 122 bits (293), Expect = 1e-26
Identities = 59/97 (60%), Positives = 72/97 (74%)
Frame = +2
Query: 353 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 532
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ++
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLN 75
Query: 533 TSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 643
+ +CQAL+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 76 EELTQCQALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 109 bits (261), Expect = 7e-23
Identities = 58/119 (48%), Positives = 76/119 (63%)
Frame = +2
Query: 272 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 451
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI +
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 452 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V LG H+
Sbjct: 73 GRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI 131
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 108 bits (260), Expect = 1e-22
Identities = 61/104 (58%), Positives = 73/104 (70%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+LQ +D IQ ++ALGD++N +CHA
Sbjct: 96 VLQCLD--------------------IQG-LLALGDYMNVQCHA 118
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 108 bits (259), Expect = 1e-22
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 640
++ + + QALI+ PTRELA Q +VV LG H C
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISC 145
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 106 bits (254), Expect = 5e-22
Identities = 53/97 (54%), Positives = 68/97 (70%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
LQ+ID + R QAL+L PTRELA Q+ + AL HL
Sbjct: 64 LQRIDAADRSVQALVLCPTRELALQVANGLTALAKHL 100
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 105 bits (253), Expect = 7e-22
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Frame = +2
Query: 380 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 559
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QAL
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 560 ILAPTRELAQQ-IQKVVIALGDHL 628
ILAPTRELAQQ I ++ LG +L
Sbjct: 107 ILAPTRELAQQTITRIFFILGVNL 130
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 105 bits (251), Expect = 1e-21
Identities = 49/104 (47%), Positives = 70/104 (67%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+L D S+++ Q LIL TR+L ++ +++ALG LN HA
Sbjct: 80 VLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHA 123
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 103 bits (247), Expect = 4e-21
Identities = 58/120 (48%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Frame = +2
Query: 278 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCI 448
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI +
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDP 128
Query: 449 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 129 SNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 101 bits (243), Expect = 1e-20
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 511
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I +++IAQ+QSGTGKTATF +
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLL 134
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKV 604
++L +I T + CQ L +APTRELA QI+ V
Sbjct: 135 AMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 101 bits (242), Expect = 2e-20
Identities = 50/100 (50%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKTATFSI 511
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
++L +ID + CQ L +APTREL QI +V I + +N
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMN 146
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 99 bits (238), Expect = 5e-20
Identities = 49/92 (53%), Positives = 65/92 (70%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 497 ATFSISILQQIDTSIRECQALILAPTRELAQQ 592
F+++ LQ D S Q L+LA TRE+A Q
Sbjct: 90 GAFAVAALQICDMSQDVTQILVLASTREIAAQ 121
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 98.3 bits (234), Expect = 1e-19
Identities = 48/101 (47%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 514
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+L +D SI QA+ ++PT+ELA Q +V+ +G N K
Sbjct: 129 MLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/96 (46%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 511
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
++L ++D +I QA+ +AP+RELA+QIQ+V+ +G
Sbjct: 207 NMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIG 242
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 96.7 bits (230), Expect = 4e-19
Identities = 46/97 (47%), Positives = 64/97 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+D SI Q L++APTRELA QI + LG + +K
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSK 99
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 96.7 bits (230), Expect = 4e-19
Identities = 46/98 (46%), Positives = 66/98 (67%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
++ R QAL+L PTRELA Q+ + + +G H K
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVK 104
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/94 (46%), Positives = 65/94 (69%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
ID QAL+L PTRELA Q+ ++ I + HL
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHL 184
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 95.1 bits (226), Expect = 1e-18
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 527 IDTS--IRECQALILAPTRELAQQIQKVVIALGDH 625
D S + +ALILAPTRELA Q+ + ++ LG H
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH 100
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 91.9 bits (218), Expect = 1e-17
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 524 QIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 628
++ I R ++LIL PTRELA QIQ+ A G HL
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHL 99
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 91.9 bits (218), Expect = 1e-17
Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 514
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVV 607
IL+ ID S R QALILAPTRELA Q+ + +
Sbjct: 61 ILETIDESSRNTQALILAPTRELAIQVAEEI 91
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/116 (42%), Positives = 73/116 (62%)
Frame = +2
Query: 272 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ 451
Q S + P L + Q + FD LK+ +L+GI GF PS +Q ++I +Q
Sbjct: 22 QQSEESPSVTIKQGLKSKHKQDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQ 81
Query: 452 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
G+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG
Sbjct: 82 GKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLG 136
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
ID S + QAL+LAPTRELAQQ+
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQV 139
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/95 (44%), Positives = 60/95 (63%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
+D ++ Q L+LAPTRELA Q+ + + H+
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHM 101
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 91.1 bits (216), Expect = 2e-17
Identities = 46/95 (48%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSIS 514
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
+L +++ QA+ LAP+RELA+Q +VV +G
Sbjct: 152 MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMG 186
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/92 (45%), Positives = 61/92 (66%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALG 619
++D RE Q L+LAPTRELAQQ+ + G
Sbjct: 70 RLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 89.8 bits (213), Expect = 5e-17
Identities = 44/101 (43%), Positives = 63/101 (62%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
Q+ + L+L TRELA QI+ LG N K A
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKA 139
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 89.8 bits (213), Expect = 5e-17
Identities = 39/94 (41%), Positives = 62/94 (65%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
++DT Q +++APTRELA Q+ + + +G H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH 96
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 89.4 bits (212), Expect = 6e-17
Identities = 45/92 (48%), Positives = 61/92 (66%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALG 619
ID I Q +ILAPTRE+A QI++V+ +LG
Sbjct: 85 MIDIKISSVQVIILAPTREIAIQIKEVIASLG 116
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 89.4 bits (212), Expect = 6e-17
Identities = 44/107 (41%), Positives = 68/107 (63%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 497 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
A F+I IL ++ A ILAPTRELAQQI++ +LG + +
Sbjct: 133 AAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVR 179
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 89.0 bits (211), Expect = 9e-17
Identities = 42/93 (45%), Positives = 61/93 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
+RE Q L+LAPTRELAQQ+ V + H
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKH 100
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 89.0 bits (211), Expect = 9e-17
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +2
Query: 356 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 529
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ+
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
+ T R QALIL PTRELA Q+ + L H
Sbjct: 68 VSTG-RHVQALILTPTRELAIQVSGEIQKLSKH 99
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/91 (45%), Positives = 61/91 (67%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVV 607
I Q+IDTS RE QA+ILAPT ELA QI K +
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEI 91
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 88.6 bits (210), Expect = 1e-16
Identities = 44/101 (43%), Positives = 68/101 (67%)
Frame = +2
Query: 332 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 511
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 634
L ++ + + + +I++PTRELA Q + + +LG + A
Sbjct: 77 GTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLGANTRA 117
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 88.2 bits (209), Expect = 1e-16
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
I R +ALIL PTRELA Q+ + L H K A
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAA 130
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 87.8 bits (208), Expect = 2e-16
Identities = 45/110 (40%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 497 ATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
A F++ +L ++ T QAL+L PTRELA Q+ + + G L A+
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGAR 158
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 87.8 bits (208), Expect = 2e-16
Identities = 38/86 (44%), Positives = 61/86 (70%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 527 IDTSIRECQALILAPTRELAQQIQKV 604
+D QA+++ PTRELA Q+ ++
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 87.8 bits (208), Expect = 2e-16
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 511
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
++L +++ Q L LAPT ELA Q +VV +G
Sbjct: 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMG 191
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 87.0 bits (206), Expect = 3e-16
Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++SGTGKT ++
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCG 108
Query: 515 ILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAK 637
+L +T I E Q +++ PTREL+ Q+ +V+ L L K
Sbjct: 109 VLG--NTKIGERTQVMVVTPTRELSTQVTEVISGLAGPLGIK 148
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 520
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 521 QQIDTSIRECQALILAPTRELAQQ 592
+++D + QAL+L+PTRELA Q
Sbjct: 65 ERLDPDNKNVQALVLSPTRELAIQ 88
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 86.6 bits (205), Expect = 5e-16
Identities = 40/91 (43%), Positives = 59/91 (64%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALG 619
IDTSI++ Q ++LAPTRELA Q+ + + + G
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFG 107
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 86.6 bits (205), Expect = 5e-16
Identities = 40/94 (42%), Positives = 61/94 (64%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
+ ++ Q LIL P REL +QI + I LG L
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGL 100
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 86.6 bits (205), Expect = 5e-16
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D NL+EE+L+ I + GFE PS +Q AI P ++ +DVI QA+SG GKTA F +S+L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 527 ID--TSIRECQALILAPTRELAQQIQK 601
ID + + QAL+L T ELA QI K
Sbjct: 190 IDPQAAPHKVQALVLCNTHELAMQIYK 216
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
QID S + Q L++APTRELA Q+
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQV 89
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 86.6 bits (205), Expect = 5e-16
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Frame = +2
Query: 212 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWD-QVVETFDDMNLKEELLRGI 388
SS D D N + +YD + G DTD + +F ++ L + ++ G+
Sbjct: 54 SSTLAVPDGAADGANSSGLQESNYDVEVQL--GDPDTDSPLSSISSFSELGLPQGIIDGL 111
Query: 389 YAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSISILQQID-TSIRECQAL 559
A F+KPS IQ RA+ + R++IAQ+QSGTGKT F ++IL ++D + QAL
Sbjct: 112 LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQAL 171
Query: 560 ILAPTRELAQQIQKVVIALG 619
LAP+RELA+QIQ V+ ++G
Sbjct: 172 ALAPSRELARQIQSVIQSIG 191
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 86.2 bits (204), Expect = 6e-16
Identities = 39/94 (41%), Positives = 65/94 (69%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
+D QA+++ PTRELA Q+ ++ I + H+
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHM 176
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 86.2 bits (204), Expect = 6e-16
Identities = 41/84 (48%), Positives = 59/84 (70%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
+IDT+ + QAL+L PTRELA Q+
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQV 89
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 86.2 bits (204), Expect = 6e-16
Identities = 41/98 (41%), Positives = 62/98 (63%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+I+ QA+++APTRELA Q+ + + +G AK
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAK 101
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/97 (41%), Positives = 63/97 (64%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
I Q+ID+S RE QALILAPT EL QI K + L +
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSN 97
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISIL 520
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 521 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
Q ID S + Q LI+APTREL QI + H+
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHI 97
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 85.4 bits (202), Expect = 1e-15
Identities = 44/92 (47%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 523
+ D+NL +LL+GIY GF +PS IQ A+ + ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALG 619
++DT I Q + L PTRELA+Q Q VV LG
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/92 (42%), Positives = 62/92 (67%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALG 619
+++ QAL++APTRELA Q+ + + +G
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIG 94
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSIS 514
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
+L ID + RE QALILAPTRELAQQI + + HL
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHL 109
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/100 (42%), Positives = 66/100 (66%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++G+GKTA F+I I
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
LQ + T+ + AL+LAPTRELA QI++ ALG + +
Sbjct: 157 LQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSSMGLR 196
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 527 IDTSIRECQALILAPTRELAQQI 595
ID QAL+LAPTRELA Q+
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQV 91
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/104 (41%), Positives = 67/104 (64%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 497 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
A F+I ILQ++ + +LILAPTREL+ QI++ +I+LG +
Sbjct: 93 AAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEI 136
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 84.6 bits (200), Expect = 2e-15
Identities = 47/94 (50%), Positives = 55/94 (58%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
I+ S + AL+L TRELA QI + +L
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYL 141
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/94 (41%), Positives = 60/94 (63%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
+I R AL++ PTRELA Q+ + AL H
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKH 114
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 84.2 bits (199), Expect = 2e-15
Identities = 44/97 (45%), Positives = 59/97 (60%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
+ D D V TF + L EE+L + GF P+ IQ AI P ++ RDV+ AQ+GTGKT
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 497 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 607
A F + +L +D R QAL+LAPTRELA Q + +
Sbjct: 97 AAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/91 (43%), Positives = 61/91 (67%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+D+ +L++ IY YGFE PS +QQ +I IQG+ + AQ+G+GKTA F IS+L
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSL 64
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALG 619
++ CQA+I++PT+EL+ Q +V+ LG
Sbjct: 65 VNPQKSICQAVIISPTKELSNQTLEVINTLG 95
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 83.4 bits (197), Expect = 4e-15
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGKTA F++ +L +
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 527 IDTSIRECQALILAPTRELAQQI 595
ID + RE Q LILAPTRELA Q+
Sbjct: 85 IDPARREPQLLILAPTRELALQV 107
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 83.4 bits (197), Expect = 4e-15
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
ILQ++ + ALILAPTREL QI + ++A+G L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTL 146
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/96 (43%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 511
V++F+++ LK ELL+G+Y GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCL 96
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
++L ++ + + Q L +APT ELA QI +V+ +G
Sbjct: 97 AMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMG 132
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 518 LQQIDT--SIRECQALILAPTRELAQQI 595
L+Q+D+ R+ QA+++ PTRELA Q+
Sbjct: 103 LEQLDSLEDCRDPQAIVIVPTRELADQV 130
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/95 (40%), Positives = 61/95 (64%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GKTA F+I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIP 61
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
I Q +D + QAL+L PTRELA Q+++ + +G
Sbjct: 62 ICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIG 96
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/96 (43%), Positives = 60/96 (62%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
+ID + + QAL+L PTRELA Q+ + G +L+
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLS 109
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 82.6 bits (195), Expect = 7e-15
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 523
F+ + L E LLR I GFE P+ +Q++AI ++ D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
+ID + R QALIL+PTREL QI
Sbjct: 64 KIDANNRNTQALILSPTRELCLQI 87
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 82.6 bits (195), Expect = 7e-15
Identities = 44/100 (44%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSISIL 520
+ + L +LL+GI GF KPS IQQ A+ P I G ++IAQA++G+GKTATF++++L
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCAL-PLILGSCTNIIAQAKNGSGKTATFALAML 159
Query: 521 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 640
+++ ++ QAL + PTRELA Q +V+ LG KC
Sbjct: 160 SKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIKC 199
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 82.6 bits (195), Expect = 7e-15
Identities = 44/104 (42%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 524 QIDT------SIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ T R +ALIL PTRELA QI + V +LN +
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIR 105
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/100 (40%), Positives = 65/100 (65%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGKT + + I
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+++ID S E QA+IL+PT EL QI V+ L L K
Sbjct: 61 IEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKK 100
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 82.2 bits (194), Expect = 1e-14
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +2
Query: 221 RRSEDWPEDSKNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAY 397
++S+D E +G +KD S ++ T D +V T + E L+
Sbjct: 10 QKSDD--ESGGDGNNKDSNSIAPSAIAINSKKKQTTKD-IVTTQGAQFISESLIGETQTK 66
Query: 398 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 577
+KPSA+ QR I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT
Sbjct: 67 DLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTH 124
Query: 578 ELAQQIQKVVIALGDHLNAKCHA 646
+LA + Q V+ LG L+AK HA
Sbjct: 125 DLAHETQNVIGVLGQFLSAKAHA 147
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/99 (38%), Positives = 60/99 (60%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++GTGKTA F +++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTV 131
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 634
L I+T + + L++ TRELAQQ + + LG + +
Sbjct: 132 LNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKS 170
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 81.8 bits (193), Expect = 1e-14
Identities = 50/141 (35%), Positives = 77/141 (54%)
Frame = +2
Query: 215 SERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 394
S+ +D P K+ P+ D+ + T+ D +V F D+ + +++
Sbjct: 68 SDHDDDDDPSADKDSPAADEEQDE----KKVATIADDGKKV--EFSDLGVIPQIVEACTN 121
Query: 395 YGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 574
GF+ P+ IQ +AI +Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPT
Sbjct: 122 MGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPT 181
Query: 575 RELAQQIQKVVIALGDHLNAK 637
RELA QI + V ALG + +
Sbjct: 182 RELAYQISQQVEALGSTIGVR 202
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 524 QIDTSIR-ECQALILAPTRELAQQIQKVVIALGDH 625
++ R +A+I+ PTRELA+QIQ V+ ALG +
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKY 96
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALG 619
ID +R QAL+L PTRELAQQ+ + + G
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYG 101
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/94 (43%), Positives = 58/94 (61%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
ID+ QA+IL PTRELA Q+ + + L +L
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYL 99
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
++D + QA++L PTRELA Q+
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQV 87
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 524 QI-DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
++ T R+ +AL+L PTRELA QI + A G + K HA
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLK-HA 103
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 520
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 521 QQIDTSIRECQALILAPTRELAQQIQK 601
QQI+ S+++ Q L+L PTREL QQ+ K
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAK 88
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 81.0 bits (191), Expect = 2e-14
Identities = 42/100 (42%), Positives = 61/100 (61%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 520
+TF+++ L L+ GF+ PS IQ I ++GRD+IA A++G+GKTA+F+I IL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 521 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 640
Q+ A+IL PTRELA QI + A+G +N C
Sbjct: 64 NQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNC 103
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCH 643
+ Q LILAPTRE+A QI V+ A+G + +CH
Sbjct: 125 LILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECH 164
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/86 (41%), Positives = 58/86 (67%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 518 LQQIDTSIRECQALILAPTRELAQQI 595
L ++D +++ Q L+LAPTRELA Q+
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQV 128
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 497 ATFSISILQQI-DTSIRECQALILAPTRELAQQIQKV 604
F I L+ + DT Q LIL PTRELA Q+ V
Sbjct: 79 LAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGV 115
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GKTA F
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 509 ISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
+ +L+++ D+ R + LIL PTRELA Q Q V+ L N
Sbjct: 246 LPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSN 289
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCH 643
+ Q LILAPTRE+A QI V+ A+G + +CH
Sbjct: 124 LVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECH 163
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/94 (40%), Positives = 60/94 (63%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
++ S + QA+++APTRELA Q+ + LG ++
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNI 121
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 527 IDTSIRECQALILAPTRELAQQIQK 601
++ + QALIL PTREL Q+ +
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSE 95
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/88 (42%), Positives = 59/88 (67%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVV 607
+ID S+++ Q L++ PTRELA Q+ + +
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEAL 96
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 80.2 bits (189), Expect = 4e-14
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Frame = +2
Query: 275 GSYDGPPG-MDPGTLDT---DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 442
G D PPG +D T + + TF+ + L L+ + A G+E+P+ IQ+ A+ P
Sbjct: 10 GRCDFPPGGIDGATSPSTVKETSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPP 69
Query: 443 CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPTRELAQQIQKVVIA 613
++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + +
Sbjct: 70 LLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHR 129
Query: 614 LGDHL 628
G L
Sbjct: 130 YGQKL 134
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 80.2 bits (189), Expect = 4e-14
Identities = 41/102 (40%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 524 QI----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ + + +AL+L PTRELA Q+ + V G HL+ K
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLK 107
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/94 (41%), Positives = 61/94 (64%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ LK +LL G+ G+E PS IQ++ I I +D++A++++GTGKT +F I ILQ
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQN 76
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
I + +++IL PTRELA QI ++ L ++
Sbjct: 77 IYSESYGIESIILVPTRELALQISSLLRKLSKYM 110
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/91 (38%), Positives = 62/91 (68%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALG 619
I + + Q L++ PTRELA Q+ + + +G
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIG 94
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 80.2 bits (189), Expect = 4e-14
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +2
Query: 239 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 418
PE ++ + + P P T +VV +F ++ L+ LLRGI + P+A
Sbjct: 15 PESPQSPKRRASDASQSEPASPPAP--TPAKEVVASFAELQLEPRLLRGIRDQKWGSPTA 72
Query: 419 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-ALILAPTRELAQQI 595
+Q +AI +QGRD++A++ +GTGKT + + IL +T +R+ + +LIL PT+ELA QI
Sbjct: 73 VQSKAIPLALQGRDILARSGTGTGKTGAYLLPILH--NTLLRKGKTSLILVPTKELALQI 130
Query: 596 QKVVIALGDH 625
KV AL H
Sbjct: 131 TKVAKALSAH 140
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/89 (47%), Positives = 53/89 (59%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 509 ISILQQIDTSIRECQALILAPTRELAQQI 595
+ ILQ + I QALILAPTRELA Q+
Sbjct: 62 LPILQNLSPEISTTQALILAPTRELAIQV 90
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 79.8 bits (188), Expect = 5e-14
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 527 IDTSIRECQALILAPTRELAQQI 595
+D SI + Q+LIL PTRELA Q+
Sbjct: 63 VDISINQTQSLILCPTRELALQV 85
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/87 (43%), Positives = 57/87 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 527 IDTSIRECQALILAPTRELAQQIQKVV 607
I+ +I Q LILAPTRELA Q+ + V
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAV 100
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 79.8 bits (188), Expect = 5e-14
Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 245 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 421
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 422 QQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 601
Q I I G DV+ QA+SG GKTA F ++ LQQI+ + L++ TRELA QI K
Sbjct: 71 QHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISK 130
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 79.8 bits (188), Expect = 5e-14
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L + +L G+ A GF++PS IQ +AI G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCH 643
+ Q L+LAPTRE+A QI VV+A+G + +CH
Sbjct: 88 LILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECH 127
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 79.4 bits (187), Expect = 7e-14
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 527 IDTSIRECQALILAPTRELAQQI 595
+++ + Q L+LAPTRELA Q+
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQV 155
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 79.4 bits (187), Expect = 7e-14
Identities = 43/92 (46%), Positives = 60/92 (65%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 520
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 521 QQIDTSIRECQALILAPTRELAQQIQKVVIAL 616
++ QAL+L PTRELA Q+ + + +L
Sbjct: 64 NRVIKG-EGLQALVLCPTRELAVQVTEEISSL 94
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 79.4 bits (187), Expect = 7e-14
Identities = 36/83 (43%), Positives = 57/83 (68%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ NL+ L+ + FEKP+ IQ R I ++ ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 527 IDTSIRECQALILAPTRELAQQI 595
ID+ I+E QA+++APTRELAQQ+
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQL 88
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 79.4 bits (187), Expect = 7e-14
Identities = 47/117 (40%), Positives = 63/117 (53%)
Frame = +2
Query: 266 KDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC 445
+D S D G + G T +F D+ L E L R + A GF+ PS +Q +
Sbjct: 16 RDDTSTDARAGANVGERATS----SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLG 71
Query: 446 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL 616
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTRE A Q + + +
Sbjct: 72 RFGCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEM 128
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/90 (38%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+ M L +LR + GF+ PS +Q ++I +QG+D++A+A++G+GKTA +SI I+Q
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83
Query: 524 QI-----DTSIRECQALILAPTRELAQQIQ 598
++ ++I+ +A++L PTREL +Q++
Sbjct: 84 KVLMAKEKSNIKGVKAVVLVPTRELCEQVK 113
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 79.0 bits (186), Expect = 9e-14
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 527 IDTSIRECQALILAPTRELAQQIQK 601
+D ++ QAL+L PTRELA Q+ K
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGK 112
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 79.0 bits (186), Expect = 9e-14
Identities = 40/94 (42%), Positives = 60/94 (63%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + LK+ELL G+ GF++ + +Q+ AI + RDV+A+A++GTGKT +F I ILQ
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGKTGSFLIPILQM 82
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
++ + QAL+L TRELA Q KV L ++
Sbjct: 83 VNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNM 116
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 514
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+GTGKTA F +
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLP 60
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVV 607
I+Q+I+ +++ QALIL PTRELA Q+ + +
Sbjct: 61 IVQKIEPGLKKPQALILCPTRELAIQVNEEI 91
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 78.6 bits (185), Expect = 1e-13
Identities = 41/85 (48%), Positives = 51/85 (60%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 527 IDTSIRECQALILAPTRELAQQIQK 601
++ + L++ TRELA QI K
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISK 131
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = +2
Query: 332 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 511
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 512 SILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 640
+LQQ+ + + +ALIL+PTR+LA QI + G + +C
Sbjct: 70 PLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHFGRQTHLRC 113
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 78.2 bits (184), Expect = 2e-13
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = +2
Query: 311 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 490
T D D+ + +F + L +++ +G+ GF+KPS IQ +AI G D+I +++SGTG
Sbjct: 15 TKDVILDENI-SFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSKSGTG 73
Query: 491 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
KT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N
Sbjct: 74 KTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 515 ILQQI------DTSIRECQALILAPTRELAQQI 595
++Q + +T+ + +ALILAPTRELAQQ+
Sbjct: 61 LIQMLSRQSREETAPKHPRALILAPTRELAQQV 93
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 527 I---DTSIRECQALILAPTRELAQQIQKVV 607
+ + + A+I+APTRELAQQI + V
Sbjct: 63 LSAGEFASDVVNAVIMAPTRELAQQIDQQV 92
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 78.2 bits (184), Expect = 2e-13
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 524 ----QIDTSI----RECQALILAPTRELAQQIQKVVIALGDH 625
Q +TS +ALIL PTRELA Q+ V A H
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKH 113
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/103 (38%), Positives = 62/103 (60%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
LQ+I ++ Q LI+ PTRELA Q+ V LG +L + A
Sbjct: 61 LQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALA 102
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/101 (32%), Positives = 64/101 (63%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+ L E++L+ + + G+ PS +Q+ I ++G++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
I+ QALI+ PTRELA Q++ + +G +C A
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSA 104
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 527 IDTSIRE--CQALILAPTRELAQQI 595
+D + R+ Q L+LAPTRELA Q+
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQV 93
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQ 523
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
++D + QAL+L PTRELA Q+
Sbjct: 64 RLDEKANDVQALVLTPTRELALQV 87
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F ++ L +L + A G+E PS IQ ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
+ID ++ E Q L+LAPTRELA Q+
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQV 108
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/87 (47%), Positives = 57/87 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 527 IDTSIRECQALILAPTRELAQQIQKVV 607
I Q LI+APTRELA QI + V
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEV 89
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 78.2 bits (184), Expect = 2e-13
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D LK E+LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 527 IDTSIRE-CQALILAPTRELAQQIQK 601
++ S C L++ TRELA QI K
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISK 128
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/92 (39%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F +M L + LL+ + G+ +P+ IQ++AI ++G+D++A+A++G+GKTA +++ ++Q+
Sbjct: 8 FHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQR 67
Query: 527 I---DTSIRE--CQALILAPTRELAQQIQKVV 607
I S+RE +ALIL PT+EL QQ+Q ++
Sbjct: 68 ILASKQSVREQDVKALILVPTKELGQQVQTMI 99
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 514
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 515 ILQQIDTSIRECQALILAPTRELAQQI 595
+LQQID R Q+LIL PTREL QI
Sbjct: 61 LLQQIDVKNRVPQSLILCPTRELCLQI 87
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
I+ QALIL PTRELA Q+ + LG L
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRL 142
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 5/104 (4%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 518 LQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNA 634
LQ + IR AL+LAPTRELAQQI+K V A L +
Sbjct: 177 LQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLES 220
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCIQG---RDVIAQAQSGTGKTATFSIS 514
F+D+NL EL++G+Y FEKPS IQ ++ P I + +IAQA +G+GKT F +
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISL-PMIMTPPHKHLIAQAHNGSGKTTCFVLG 151
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
+L ++D ++RE QAL + PTRELA Q +V+ +G
Sbjct: 152 MLSRVDPTLREPQALCICPTRELANQNMEVLQKMG 186
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISI 517
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 518 LQQIDTSIRE-CQALILAPTRELAQQI 595
L++ID + +A+I+ PTRELA QI
Sbjct: 78 LERIDFKANKFVKAIIVTPTRELALQI 104
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 77.4 bits (182), Expect = 3e-13
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Frame = +2
Query: 323 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 502
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 503 FSISILQQIDT-----SIRECQALILAPTRELAQQI 595
F + IL +I + R C+AL+LAPTRELA QI
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQI 146
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/93 (40%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 527 IDTSIRE--CQALILAPTRELAQQIQKVVIALG 619
+ T + +ALIL+PTRELA Q Q+ + +G
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIG 132
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/88 (46%), Positives = 56/88 (63%)
Frame = +2
Query: 356 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT 535
M +++L G+ GF++PS IQ +AI G D+I +A+SGTGKT F I L+ ID
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 536 SIRECQALILAPTRELAQQIQKVVIALG 619
I Q LILAPTRE+A QI +V ++G
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVG 88
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 527 IDT-SIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
++T S ++LI+ PTRELA Q KV LG N K
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLK 112
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D NL ++R I GF S IQ A+ + GRD+I +AQ+GTGKTA F I++LQ+
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 527 I------DTSIRECQALILAPTRELAQQIQK 601
+ + E +ALILAPTRELA QI K
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAK 190
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 77.0 bits (181), Expect = 4e-13
Identities = 33/87 (37%), Positives = 57/87 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 527 IDTSIRECQALILAPTRELAQQIQKVV 607
+ Q LIL PTREL +Q+ K +
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAI 92
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 524 Q-IDTSIRECQALILAPTRELAQQIQKVVIALG 619
+ + T + L++APTRELA QI +LG
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLG 94
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISI 517
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 518 LQQIDTSI--RECQALILAPTRELAQQI 595
L++ D I + C+ L+LAPTREL QI
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQI 91
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/95 (40%), Positives = 61/95 (64%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+D+N+ EE+L I G++KP+ IQ+ + +D+I +++G+GKTA F I ILQ
Sbjct: 157 TFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQ 216
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
+ + + AL+++PTREL QI + ALG +L
Sbjct: 217 DLKVNKQSFYALVISPTRELCIQISQNFQALGMNL 251
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351
Query: 518 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
L+++ + + +IL PTRELA Q V + L H + K
Sbjct: 352 LERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIK 394
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 527 IDTSI--RECQALILAPTRELAQQIQKVV 607
+ +++ +ALIL+P RELA Q KVV
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVV 159
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 76.6 bits (180), Expect = 5e-13
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 514
+ TF + ++++ ++ I G KP+ IQ++AI ++ D I AQ+GTGKTA F +
Sbjct: 1 MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP 60
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQK 601
+L ID + QALIL+PTREL QQI+K
Sbjct: 61 VLHHIDANSDHIQALILSPTRELVQQIKK 89
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 511
+TF+D+ L ELLRG+Y FEKPS IQ + + R++IAQA +G+GKT F++
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNGSGKTTCFTL 146
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
+L +ID +++ Q L++ PTREL Q V+ +G +
Sbjct: 147 GMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKY 184
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 527 ID--TSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ + +ALIL+PTRELA Q K + LG + K
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELK 139
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 76.6 bits (180), Expect = 5e-13
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = +2
Query: 335 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 514
V TF ++ L + L+ + G P+A+Q+R I ++GRDV+ A++G+GKTA F++
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP 134
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
IL ++ AL LAPTRELA Q+ + ALG L +C A
Sbjct: 135 ILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLA 178
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 76.2 bits (179), Expect = 6e-13
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 527 IDTS---IRECQALILAPTRELAQQIQKVVIALGDHL 628
+ S R ++LIL PTRELA Q+ + G +L
Sbjct: 353 LAGSRARARMPRSLILEPTRELALQVAENFKLYGKYL 389
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/91 (39%), Positives = 55/91 (60%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALG 619
+ + L++ PTRELA Q+ + G
Sbjct: 63 MKAD-GSVEGLVIVPTRELAMQVSDELFRFG 92
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 76.2 bits (179), Expect = 6e-13
Identities = 42/105 (40%), Positives = 62/105 (59%)
Frame = +2
Query: 305 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 484
P T D ++D ++ F M L E +LRG+ F PS IQ RAI G D++ QA+SG
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSG 69
Query: 485 TGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
TGKT F++ I + + + Q+L + PTRE+A QI+ V+ +G
Sbjct: 70 TGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIG 114
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 76.2 bits (179), Expect = 6e-13
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Frame = +2
Query: 251 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 403
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 404 EKPSAIQQRAIMPCIQG---RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 574
+PS IQ +P I +D+IAQA +G+GKT F + +L ++D + + QA+ + PT
Sbjct: 122 SRPSKIQA-VTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPT 180
Query: 575 RELAQQIQKVVIALGDHLNAKC 640
RELAQQ + V++ +G C
Sbjct: 181 RELAQQNKSVLMRMGKFTGITC 202
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 76.2 bits (179), Expect = 6e-13
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Frame = +2
Query: 296 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 469
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 470 QAQSGTGKTATFSISILQQIDTSIREC---QALILAPTRELAQQIQKVVIALGDHLN 631
A +GTGKTA F++ +L+++ R+ + L+L PTREL Q+ V L N
Sbjct: 261 CAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCN 317
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 514
V+ F+ L ++ + GF P+ IQ++A+ + G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 515 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 619
+++ ID+++++ QAL+L+PTRELA Q+ + + LG
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLG 137
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 75.8 bits (178), Expect = 9e-13
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 527 I--DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ I + L+L+PTREL+ QI + AL L+ +
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLR 122
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 527 IDTSIRECQALILAPTRELAQQI 595
+ + Q L+LAPTRELA Q+
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQV 99
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/91 (42%), Positives = 56/91 (61%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLT 93
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIAL 616
+ E + LIL P+RE+AQQI KV + L
Sbjct: 94 TLQKK-PEARGLILVPSREMAQQIYKVFLEL 123
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF++++L +LL I + KP+ IQ AI + +DV+A A +GTGKTA F + LQ
Sbjct: 2 TFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQ 61
Query: 524 QI---DTSIRECQALILAPTRELAQQIQKVVIALGDH 625
+ R+ + LILAPTRELA QI KVV LG H
Sbjct: 62 FLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAH 98
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 75.4 bits (177), Expect = 1e-12
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 527 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
+ +ALIL PTRELA Q+ + A H+N
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMN 102
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/101 (36%), Positives = 67/101 (66%), Gaps = 5/101 (4%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
D+ +TF+++ L+ L+R + G EKP++IQ+ AI ++G+DV+A+A++G+GKT +
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 509 ISILQQI--DTSIRE---CQALILAPTRELAQQIQKVVIAL 616
+ +LQ++ ++ R A +L PTREL QQ+ V++L
Sbjct: 80 LPLLQKLFCESESRNKLAPSAFVLVPTRELCQQVYSEVLSL 120
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V TF ++ L E LL + GF +P+AIQ AI P + GRDV+ A +GTGKTA + +
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62
Query: 518 LQQIDTSIRE----CQALILAPTRELAQQIQKVVIALGDH 625
LQ + R+ + LIL PTRELA Q+ L H
Sbjct: 63 LQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKH 102
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 74.9 bits (176), Expect = 1e-12
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Frame = +2
Query: 251 KNGPSKDQGSY-DGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 427
KNG + G + P G +D + + + F + ++ + + ++A G + IQ
Sbjct: 71 KNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLFPIQA 130
Query: 428 RAIMPCIQGRDVIAQAQSGTGKTATFSISIL---QQI-DTSIRECQALILAPTRELAQQI 595
+ P G DVIAQA++GTGKT +F + ++ QQ S R+ L LAPTRELA+QI
Sbjct: 131 QTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQI 190
Query: 596 QKVVIALGDHLNAKC 640
+ A+G HL+ C
Sbjct: 191 SEYFEAIGPHLSTTC 205
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/95 (36%), Positives = 61/95 (64%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF ++ L +++L + F + + IQ RAI ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
+I+ + R QA+I+APTRELA QI + G +
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRI 96
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 74.9 bits (176), Expect = 1e-12
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GKTA F
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 509 ISILQQID--TSI-RECQALILAPTRELAQQIQKVV 607
I +L ++ TS + +ALIL PTRELAQQ+ V
Sbjct: 100 IPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSV 135
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F +L ++ + +KP+ IQ R I ++GRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 527 IDTSIRECQALILAPTRELAQQIQK 601
++ ++E QA+I+APTRELA QI +
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHE 88
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ TF+ + + L+ G+ P+ +Q I IQ +D++ +Q+GTGKT + + I
Sbjct: 1 MNTFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPI 60
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVV 607
++IDTS RE QALILAPT EL QI V
Sbjct: 61 FEKIDTSKRETQALILAPTHELVMQITNQV 90
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 74.9 bits (176), Expect = 1e-12
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 527 IDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 628
+ S R+ +AL+L PTRELA Q+ + A+ HL
Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHL 99
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 511
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 512 SILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCH 643
++L +ID ++ Q + LAPT ELA+QI +VV +G + N K H
Sbjct: 677 TMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIH 721
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/116 (36%), Positives = 70/116 (60%), Gaps = 12/116 (10%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 509 ISILQQIDTSIRECQ------------ALILAPTRELAQQIQKVVIALGDHLNAKC 640
I ILQ + + + + A +L+PTRELA QI + ALG ++ +C
Sbjct: 65 IPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRC 120
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 527 -IDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
ID +AL++ PTRELA QI + + L H
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVH 96
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Frame = +2
Query: 323 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 502
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 503 FS---ISILQQIDTSIRECQALILAPTRELAQQI 595
F+ I++L + R ++L+L PTRELA Q+
Sbjct: 65 FTLPMITMLARGRARARMPRSLVLCPTRELAAQV 98
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI--- 517
F ++ + E+ +GI GF + + IQ++A+ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 518 -LQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDH 625
L Q T +ALILAPTREL QI+K ALG +
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKY 100
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/108 (34%), Positives = 64/108 (59%)
Frame = +2
Query: 311 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 490
T D + Q+ + F ++L+ +++RG+ A F P+ IQ AI + G D++ Q++SGTG
Sbjct: 16 TSDVEAGQM-KHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 491 KTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 634
KT + ++ LQ S + + L++ PTRELA Q+ + LG+ L +
Sbjct: 75 KTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRS 122
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = +2
Query: 320 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 487
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +G+
Sbjct: 153 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 212
Query: 488 GKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 643
GKT FSI IL Q+ + + +ALI++PTRELA QI + +I + + + H
Sbjct: 213 GKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIH 265
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 518 LQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
L+++ + + ++L PTRELA Q V L H + K
Sbjct: 335 LERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIK 377
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = +2
Query: 320 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 487
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +G+
Sbjct: 154 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 213
Query: 488 GKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCH 643
GKT FSI IL Q+ + + +ALI++PTRELA QI + +I + + + H
Sbjct: 214 GKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIH 266
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 74.1 bits (174), Expect = 3e-12
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ L L + G+E P+ IQ AI ++G D++ AQ+GTGKTA FS+ ILQ
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 527 IDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+ R+ + LIL PTRELA QI + + A HLN K HA
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSKHLNMK-HA 109
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F D L ++ L G+ + KP+AIQ+ +I+P +QG+D++A A++G+GKT F I + +
Sbjct: 63 SFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFE 122
Query: 524 QIDTS----IRECQALILAPTRELAQQIQKVVIALG 619
++ T+ + ALI+ PTRELA QI + V +G
Sbjct: 123 KLYTNQWTKLDGLGALIITPTRELALQIFETVAKIG 158
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ M L EL R I + GF P+ IQ++AI + GRD++A +++G+GKTA F I ++ +
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 527 ID--TSIRECQALILAPTRELAQQIQKVVIAL 616
+ +++ + LIL PTRELA QI V+ AL
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKAL 103
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/100 (38%), Positives = 58/100 (58%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ TFD + +K+ LL + +G KP+ IQQ I P + +V+ A++G+GKTA F++ I
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ + T AL+L PTRELA QI A G +N +
Sbjct: 89 IHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIR 128
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/89 (41%), Positives = 54/89 (60%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V++F D+ LK + +G++ S IQ ++P ++GRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKV 604
Q+ SI Q LIL PTREL+ QI+ V
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNV 97
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D LK EL I GFE PS +Q +A+ + G D++AQA+SG GKTA F ++L+Q
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 527 IDTSIR----ECQALILAPTRELAQQIQK 601
++ + CQA++L RELA QI++
Sbjct: 98 VEKVPQGQKPYCQAVVLVHARELAYQIEQ 126
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D LK ELLR I GFE PS +QQ I I G D++ QA+SG GKTA F +SILQQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 527 IDTS 538
+DT+
Sbjct: 117 LDTN 120
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 9 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 68
Query: 509 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ IL + + + AL+L PTRELA QI + ALG + +
Sbjct: 69 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQ 111
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/96 (37%), Positives = 60/96 (62%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
+Q+I+ +AL+L PTRELA+Q+Q + H
Sbjct: 61 IQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRH 95
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = +2
Query: 329 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 508
++ +TF D+ + + L G+ KP+ IQ AI +QGRD+I A++G+GKT F+
Sbjct: 20 EEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFA 79
Query: 509 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ IL + + + AL+L PTRELA QI + ALG + +
Sbjct: 80 LPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQ 122
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/105 (33%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
D D + ++F ++ L + +L+ + G+ +P+ IQ++ I I+G+D++ +A++G+GKT
Sbjct: 4 DEDNETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRARTGSGKT 63
Query: 497 ATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVIAL 616
A F+I ++Q+I +E + LI+AP++EL +QI V+I+L
Sbjct: 64 AAFTIPLIQKILSNKQTRKQQEIKGLIIAPSKELCKQIHDVIISL 108
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 524 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
Q+ S + +ALI APTRELA+QI + A + N
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTN 102
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 73.3 bits (172), Expect = 5e-12
Identities = 33/102 (32%), Positives = 62/102 (60%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 520
++F + L +E+ R + G+E P+ +Q I +Q +D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 521 QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+ ++ + QAL+L PTRELA Q+++ + +G K A
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAA 105
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 524 QIDT-----SIRECQALILAPTRELAQQIQKVVIALGD 622
+ T + R +ALIL+PTRELA QI + + L +
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSE 102
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GKT F I +
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471
Query: 518 LQQI--------DTSIRECQALILAPTRELAQQIQKVVIALGDH 625
L I DT AL++APTREL QQI+K H
Sbjct: 472 LIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQH 515
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/86 (37%), Positives = 59/86 (68%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 518 LQQIDTSIRECQALILAPTRELAQQI 595
++++ + Q+LILAPTRELA Q+
Sbjct: 61 IEKV-VGKQGVQSLILAPTRELAMQV 85
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 520
+TF ++NL LLR G++KP+ IQ I + GRD+ A A +G+GKTA F++ L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 521 QQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 640
+++ + + LIL PTRELA QI ++ L + KC
Sbjct: 227 ERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKC 269
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 72.9 bits (171), Expect = 6e-12
Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ +FDD+ L + L+G+ G+ KP+ IQ+ I + G+D++ AQ+G+GKT F I I
Sbjct: 50 INSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPI 109
Query: 518 LQQID----TSIRECQALILAPTRELAQQIQKVVIALGDH 625
L+++ T + AL++ PTRELA QI + + +G+H
Sbjct: 110 LERLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEH 149
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 524 QI-----DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
++ S + L+L PTRELA+Q+ + IA G L+ +
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLR 104
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 72.9 bits (171), Expect = 6e-12
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 527 ID--TSIRECQALILAPTRELAQQIQKVVIAL--GDHLN 631
++ + R QALIL PTRELA Q++ + L G +N
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRIN 104
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 72.9 bits (171), Expect = 6e-12
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Frame = +2
Query: 209 YSSERRSE--DWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 382
Y E +E D +S+ + + D DP T D + +F MNL LLR
Sbjct: 179 YDEEGENEVVDSDSESEEETAAEIARKDAFFSSDPTTTDPT---LPSSFTAMNLSRPLLR 235
Query: 383 GIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----E 547
+ + F P+ IQ RAI + GRD++ A +G+GKTA F + IL+++ R
Sbjct: 236 ALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAA 295
Query: 548 CQALILAPTRELAQQIQKVVIALGD 622
C+ L+L PTRELA Q + V AL +
Sbjct: 296 CRVLVLCPTRELAVQCEAVGKALAE 320
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+D N LL + + GF KP+ IQ AI + D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 524 Q-IDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 631
+ I+++ L+L PTRELA QI + + +N
Sbjct: 62 KIIESNTDSLDTLVLVPTRELAIQIDQQIEGFSYFIN 98
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V+TF+++ L LL G+ F P+ IQ AI + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQ 598
+Q + +I + A+I+ PTRELA Q+Q
Sbjct: 84 VQSFNPNINQPHAMIVVPTRELAIQVQ 110
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/97 (37%), Positives = 62/97 (63%)
Frame = +2
Query: 317 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 496
D + + V ++ L +L GI A G+++P+ IQ+ + ++G+D++A+A++G+GKT
Sbjct: 3 DVEEEVKVVQWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKT 62
Query: 497 ATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 607
+ I I+Q+I I +ALI+ PTREL QI+ VV
Sbjct: 63 GAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVV 98
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/91 (39%), Positives = 57/91 (62%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F++ NL+ EL+ I G+ +P+ +Q AI + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALG 619
+ +ALIL PTRELA Q+ KV ALG
Sbjct: 64 -TAKEKGIRALILLPTRELAVQVAKVSEALG 93
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 72.5 bits (170), Expect = 8e-12
Identities = 35/96 (36%), Positives = 54/96 (56%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 625
++ + R Q ++L P+RELA Q+ + L H
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMH 98
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 72.5 bits (170), Expect = 8e-12
Identities = 34/97 (35%), Positives = 58/97 (59%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + ++ ++ R + GFE + IQ + + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
++ R QALI+ PTREL Q+ + + +G ++ K
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVK 101
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F D+ L LL+ + F+KP+ +Q +AI ++GRDV+A+A++G+GKTA + + ILQ
Sbjct: 44 SFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQ 103
Query: 524 ------QIDTSIRECQALILAPTRELAQQIQKVV 607
QI+ +LIL PTREL Q+ K V
Sbjct: 104 AVLKRKQINPGATYISSLILVPTRELTVQVTKEV 137
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/100 (39%), Positives = 60/100 (60%)
Frame = +2
Query: 299 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 478
++P DT V +F +M LK+E+++ I GFE PS +Q + I + +D++ QA+
Sbjct: 21 VEPSNKDTYVGTV--SFQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDILCQAK 78
Query: 479 SGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 598
SG GKTA F +SIL Q A+++ TRELA+Q+Q
Sbjct: 79 SGMGKTAVFVLSILNQGLFLGDHVSAIVICHTRELARQVQ 118
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF + L E+L + G+ P+ IQ + I + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 524 QI----DTSI----RECQALILAPTRELAQQIQKVVIALGDHL 628
++ +TS+ +ALI+APTRELA QI + V G +L
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYL 108
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/86 (40%), Positives = 55/86 (63%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
++ F ++ + E + G + + IQ++AI + G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 518 LQQIDTSIRECQALILAPTRELAQQI 595
L++ID + QALI+APTRELA QI
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQI 89
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 10/94 (10%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 524 QI------DTS----IRECQALILAPTRELAQQI 595
++ D S R+ + L+L PTRELA Q+
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQV 95
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/94 (38%), Positives = 57/94 (60%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ +NL L R I G+ + IQ++AI + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
++T +++ QA+IL PT ELA QI + V +L
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYL 96
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 527 IDTSIRE--CQALILAPTRELAQQIQKVVIAL 616
+ T R+ +ALIL PTRELA QI + ++ +
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQI 95
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 524 QIDTSIRECQALILAPTRELAQQI 595
++ +AL+LAPTRELA QI
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQI 87
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L + L + G+ +P+ IQ +A+ + GRDV AQ+GTGKTA F++ IL +
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHK 194
Query: 527 IDTSIRECQALILAPTRELAQQIQK 601
+ R + L+L PTRELA Q+++
Sbjct: 195 LGAHERRLRCLVLEPTRELALQVEE 219
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/87 (42%), Positives = 55/87 (63%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
V + D+ L E+++ I G+ + + +Q AI ++ +DVIA+A +GTGKT F I +
Sbjct: 11 VVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPM 70
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQ 598
++ ID QAL+LAPTRELA QIQ
Sbjct: 71 VEHIDPESDAVQALVLAPTRELALQIQ 97
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/88 (37%), Positives = 57/88 (64%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVV 607
+D+ Q +I+ PTRE++ QI++ V
Sbjct: 83 NLDSRSSHIQKVIVTPTREISVQIKETV 110
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
VE+F+++ L ++R ++ FE P+ +Q + I +QGRDV A A +G+GKTA F I
Sbjct: 15 VESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPT 74
Query: 518 LQQI---DTSIRECQALILAPTRELAQQIQKVV 607
++++ ++ + +A+IL+PTRELA Q V+
Sbjct: 75 VERLLRSKSTEAQTRAVILSPTRELAAQTYSVL 107
>UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
MAK5 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 754
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +2
Query: 233 DWPEDSKNGPSKDQGSYDGP-PGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEK 409
D K P+KD + G+D +L D D + ++++L + G+ GF++
Sbjct: 148 DLKSKKKQKPNKDDELRENAFVGVD-ASLPKDTDLPKWSMENVSLSTYTINGLAGCGFKE 206
Query: 410 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ----QIDT---SIRECQALILA 568
P+AIQ++AI +QG+DVI +A +G+GKT + I IL+ Q+++ +I+ A+I A
Sbjct: 207 PTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILERCLAQLESKTNTIKPPTAMIFA 266
Query: 569 PTRELAQQI 595
PTRELA Q+
Sbjct: 267 PTRELAHQV 275
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 332 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 511
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 512 SILQQI---DTSIRECQALILAPTRELAQQIQKV 604
I++++ I + ++L PTRELA Q+ V
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADV 321
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 71.7 bits (168), Expect = 1e-11
Identities = 35/87 (40%), Positives = 54/87 (62%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F + L E++L GI G+ PS IQ AI ++G++++ Q+QSG+GKT F +S LQ
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKGKNLVMQSQSGSGKTMAFLLSTLQ 85
Query: 524 QIDTSIRECQALILAPTRELAQQIQKV 604
I+ CQ +I+ TRELA+Q +
Sbjct: 86 LINRKDPFCQVIIIVNTRELARQTASI 112
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 524 QIDTSIREC---QALILAPTRELAQQIQKV 604
++ RE + L+L PTREL Q+ V
Sbjct: 242 RLIYKPREAPVTRVLVLVPTRELGIQVHAV 271
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 527 I-----DTSIRECQALILAPTRELAQQIQKVV 607
I + +ALILAPTRELA QI++ +
Sbjct: 149 IIGLGDKRRPKTARALILAPTRELAVQIEQTI 180
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Frame = +2
Query: 239 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSA 418
P+ + N ++ DGP + TL V +F D+ ++E++ + + G P
Sbjct: 19 PDVALNDVTRTTPGLDGPTHEEAKTLTETTVSVPTSFADLGVREDICQALEGVGIVSPFP 78
Query: 419 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----------TSIRECQALILA 568
IQ +I ++G D+I QA++GTGKT F I+IL +I T+ + QAL++
Sbjct: 79 IQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMC 138
Query: 569 PTRELAQQIQK 601
PTRELA Q+ K
Sbjct: 139 PTRELALQVSK 149
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSI 511
++TF + + ++++G+ GF + +Q++ I+P + R D++ AQ+GTGKTA F I
Sbjct: 1 MKTFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGI 59
Query: 512 SILQQIDTSIRECQALILAPTRELAQQI 595
++Q DT ++ QAL+L PTREL Q+
Sbjct: 60 PLIQLTDTRLKRTQALVLCPTRELCVQV 87
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 527 I-----DTSIRECQALILAPTRELAQQIQKVVIAL--GDHL 628
+ + R C+ LILAPTREL QI + + A G HL
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHL 173
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 71.7 bits (168), Expect = 1e-11
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 524 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHL 628
+ + + +AL+L PTRELA Q+ + V G +L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYL 100
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/92 (34%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F ++ L + +L+ + G+++P+ IQ AI ++G+DV+ +A++G+GKTAT+++ ++Q+
Sbjct: 11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQK 70
Query: 527 I-----DTSIRECQALILAPTRELAQQIQKVV 607
I + S + A++LAPT+EL +Q +KV+
Sbjct: 71 ILNSKLNASEQYVSAVVLAPTKELCRQSRKVI 102
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +2
Query: 290 PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVI 466
P M + +++ +++ L LL+ +Y GFEKP+ IQ AI ++ RD+I
Sbjct: 18 PSPMTDAVVASEYLDESAKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDII 77
Query: 467 AQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 634
A+A +G+GKT +SI I+Q I S +++IL PT+ELA Q+ K + L + N+
Sbjct: 78 AKASTGSGKTGAYSIPIIQNILSEGLSEHNIKSVILVPTKELANQVTKFIEKLLVYCNS 136
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F M L +L+GI G++ P+ IQ++ I ++GRD++A A++G+GKTA F I + ++
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 527 IDTSIRE----CQALILAPTRELAQQIQKVVIALG 619
+ IR+ +ALIL+PTRELA Q K + LG
Sbjct: 98 L--KIRQAKVGARALILSPTRELALQTLKFIKELG 130
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+++ L LL + G ++PS IQ +AI P ++G+DV+ +Q+G+GKTA F + +LQ+
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 527 IDTS--IRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ + +ALIL PTRELA Q V LG L+ K
Sbjct: 82 LTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLK 120
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Frame = +2
Query: 251 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVE-TFDDMNLKEELLRGIYAYGFEKPSAIQQ 427
++GP + S+ P + + +V E TF ++ L EEL+ + G P AIQ
Sbjct: 116 RSGPPRSPRSF-APSATEQALTAAEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQS 174
Query: 428 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPTRELAQQ 592
R + I GRD++ +A++G+GKT F + +L ++ R + L+L PTRELA Q
Sbjct: 175 RTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQ 234
Query: 593 IQKVVIALGDHLNAK 637
+ + LGD L+ +
Sbjct: 235 VADALRPLGDSLDLR 249
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/86 (38%), Positives = 56/86 (65%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
VET +++ + + + + G + S IQ +++ +QG+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 518 LQQIDTSIRECQALILAPTRELAQQI 595
L++I+ + QA++L PTRELA+Q+
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQV 88
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F+ MNL + + I GF P+ IQ++AI ++GRDV+A +++G+GKTA F I ++ +
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
Query: 527 IDTSIR--ECQALILAPTRELAQQIQKVV 607
+ R +ALI+ PTRELA QI V+
Sbjct: 361 LQNHSRIVGARALIVVPTRELALQIASVL 389
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D+ ++++L+ + P+ +Q+++I ++G+D++A AQ+GTGKTA F + I+Q
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 527 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ R ALIL PTRELAQQ+ + +H + +
Sbjct: 69 VQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLR 107
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 523
F NL +L+ + F++PS IQ AI P IQ + D+IA +Q+G+GKTAT +I I
Sbjct: 17 FITFNLDPLILKALDKMNFKEPSRIQTEAI-PLIQKKQDLIALSQTGSGKTATCAIPICN 75
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+++T + + QALI+ PTRELA Q +G + K A
Sbjct: 76 RVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFA 116
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/102 (37%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 524 QIDTS----IRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
++ + R +AL+LAPTRELA Q+ + G L +
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMR 106
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 524 QIDTSIR----ECQALILAPTRELAQQIQKVVIALGDHL 628
+ + + +AL+L PTRELA Q+ + V G +L
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYL 100
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + L E+++ + G+ P+ IQ +AI + +D++ AQ+GTGKTA F++ ++QQ
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 527 -----IDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
I R +A+IL+PTRELA QI + ++ G L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRL 203
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/101 (34%), Positives = 57/101 (56%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+ Q LIL P RELA Q+ + + +L K A
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTA 104
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D +L +L + ++ P+ IQQ AI +QG+D++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 527 IDTSIR-----ECQALILAPTRELAQQI 595
+ + R + + L+L PTRELA Q+
Sbjct: 63 LSSKERNKKRPQTRVLVLVPTRELANQV 90
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/100 (32%), Positives = 60/100 (60%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 527 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHA 646
+ + QALIL PTRELA Q+++ + +G K A
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATA 103
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/91 (39%), Positives = 57/91 (62%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
TFD +N++ L++ + ++P+ IQ+ I ++GRD I +++G+GKT F++ ILQ
Sbjct: 196 TFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 255
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIAL 616
Q + +IL PTRELA QI + VIAL
Sbjct: 256 QWAANPSAIFGVILTPTRELALQIMEQVIAL 286
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +2
Query: 341 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 520
+TF D+ L E+L+ + G++KP+ IQ+ +I +Q +D+I AQ+G+GKTA+F + ++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMV 68
Query: 521 Q---QIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
Q + R +I+ PTRELA Q+ +V+ +G L
Sbjct: 69 QHLLNVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKAL 107
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/72 (43%), Positives = 52/72 (72%)
Frame = +2
Query: 392 AYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAP 571
A GF+KP+ +Q++A + G+DVIA++ +GTGKT +++ +L++I + QA+ILAP
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 572 TRELAQQIQKVV 607
+REL QI +V+
Sbjct: 81 SRELVMQIFQVI 92
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI---SI 517
F D+ L E + R I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+F++ I
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 518 LQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 628
L R ++LIL PTRELA Q+ + + G +L
Sbjct: 285 LSDRRARARMPRSLILEPTRELALQVAENFVKYGQYL 321
>UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat).
ROK1-like protein; n=2; Dictyostelium discoideum|Rep:
Similar to Rattus norvegicus (Rat). ROK1-like protein -
Dictyostelium discoideum (Slime mold)
Length = 668
Score = 70.5 bits (165), Expect = 3e-11
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +2
Query: 200 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELL 379
N S E + + + +K + DG DP T ++ Q+ F +++ LL
Sbjct: 158 NKKVSKETQEDKHKREIATFRNKHRIKVDGTDIPDPMT---EFSQLENRF---KVRKYLL 211
Query: 380 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQA 556
I G+++PS IQ + I ++ R+V+A A +G+GKTA+FSI ILQ + +E ++
Sbjct: 212 NNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQALYEPKKEGFRS 271
Query: 557 LILAPTRELAQQIQK 601
+I+APTRELAQQI +
Sbjct: 272 VIIAPTRELAQQIYR 286
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/98 (36%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 523
F+++NL + +L I GFEKP+ IQ + I + +++AQA++G+GKTA+F+I +++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67
Query: 524 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 637
++ + +A+IL PTRELA Q+ + +L + N K
Sbjct: 68 LVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLK 104
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 524 QI---DTSIRECQALILAPTRELAQQIQKV 604
++ + + LIL PTRELA Q V
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSV 349
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F M L + +GI G++ P+ IQ++ I + G+DV+A A++G+GKTA F + + ++
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 527 IDTSIRE--CQALILAPTRELAQQIQKVVIALGDHLNAK 637
+ T + +ALIL+PTRELA Q K LG K
Sbjct: 158 LKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLK 196
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 70.1 bits (164), Expect = 4e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SIS 514
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGKTA+F I
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 515 ILQQIDTSIRECQALILAPTRELAQQI 595
IL R ++LIL PTRELA Q+
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQV 88
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +2
Query: 344 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 523
+F+ + + + LL I G+EKP+ IQ RAI + DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 524 QI----DTSIRECQALILAPTRELAQQI 595
++ D R + L++APTREL+ QI
Sbjct: 62 RLRKTSDDKQRALRGLVIAPTRELSIQI 89
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = +2
Query: 377 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIR 544
LR I G+ P+AIQ +AI + GRDV+ AQ+G+GKTA F++ +LQQ+ + R
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPR 76
Query: 545 ECQALILAPTRELAQQIQKVVIALGDHL 628
+ LIL PTRELA Q+ + + +L
Sbjct: 77 PTRGLILVPTRELAAQVGEAIAGFAKYL 104
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 338 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 517
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 518 LQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGD 622
++ Q TS+ AL+++PTRELA Q +V++ +G+
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGN 147
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Frame = +2
Query: 347 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 526
F D L EL+ I+ GF + IQ + + ++G+D I +AQ+GTGKTA F ISI+ Q
Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70
Query: 527 IDTS-------IRECQALILAPTRELAQQIQKVVIAL 616
+ + + E +ALI+APTREL QI K AL
Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAAL 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,093,016
Number of Sequences: 1657284
Number of extensions: 12709683
Number of successful extensions: 36296
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 34459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35628
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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