Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n11
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F602 Cluster: Endoplasmic reticulum protein; n=1; Bom...    36   1.1  
UniRef50_Q9U421 Cluster: P-type ATPase2; n=10; Plasmodium|Rep: P...    34   3.3  
UniRef50_A0DX44 Cluster: Chromosome undetermined scaffold_68, wh...    34   3.3  
UniRef50_Q8XLF3 Cluster: Putative uncharacterized protein CPE108...    33   4.3  
UniRef50_Q0W7B8 Cluster: Putative uncharacterized protein; n=2; ...    33   4.3  
UniRef50_Q018C1 Cluster: Chromosome 05 contig 1, DNA sequence; n...    33   5.7  
UniRef50_Q0LMY6 Cluster: Chemotaxis sensory transducer; n=1; Her...    32   10.0 
UniRef50_Q015J5 Cluster: 5-alpha-taxadienol-10-beta-hydroxylase;...    32   10.0 
UniRef50_Q6CKU7 Cluster: Similar to sgd|S0005394 Saccharomyces c...    32   10.0 

>UniRef50_Q2F602 Cluster: Endoplasmic reticulum protein; n=1; Bombyx
           mori|Rep: Endoplasmic reticulum protein - Bombyx mori
           (Silk moth)
          Length = 210

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 28/120 (23%), Positives = 57/120 (47%)
 Frame = +1

Query: 250 YYIIGIFAYFATIIYHGMYIPLQNIIRLIFSKNIYEVEKLILLSRVEKNYIIAGFSLFLL 429
           Y  IG+ A F       +     N+  +  +    E++  + L R ++N+ I GF++FL 
Sbjct: 53  YVFIGVLALFLIDAVREIR-KYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFL- 110

Query: 430 VVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETI 609
             TF ++ L++      E+ +++E ++      +E    +  +ILAN L+ +    Y+ I
Sbjct: 111 --TFVIRRLITMLIIQDELKQKAEKII---KQAEETVKQAKTSILANTLQSEELQHYDEI 165


>UniRef50_Q9U421 Cluster: P-type ATPase2; n=10; Plasmodium|Rep:
           P-type ATPase2 - Plasmodium falciparum
          Length = 1555

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1

Query: 244 KKYYIIGIFAYFATIIYHGMYIPLQNIIRLIFSK 345
           KK YI+GI ++F+ ++  G ++P+  I+ + F K
Sbjct: 475 KKPYIVGIISFFSWVVITGNFVPISLIVTMSFVK 508


>UniRef50_A0DX44 Cluster: Chromosome undetermined scaffold_68, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_68,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 574

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
 Frame = +1

Query: 259 IGIFA---YFATIIYHGMYIPLQNIIR----LIFSKNIYEVEKLILLSRVEKNYIIAGFS 417
           +GIF    + A  I   ++ P+Q II     ++  +N   + K ILL++    ++     
Sbjct: 429 LGIFLGAMFIAICILILIFYPIQKIIDNCHYIMGIRNKQNMNKRILLTKFFMPFLNPQLQ 488

Query: 418 LFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMKEKKMIS-NENILANLLRVK 585
           L  L  T  VK  LS + +   +C+  E L   P  +K+K  +S N  +  N++ ++
Sbjct: 489 LLFLAYTNLVKRFLSLSHTKGSLCKTQEALQY-PKKIKQKAHLSLNRYLKKNMILIE 544


>UniRef50_Q8XLF3 Cluster: Putative uncharacterized protein CPE1089;
           n=2; Clostridium perfringens|Rep: Putative
           uncharacterized protein CPE1089 - Clostridium
           perfringens
          Length = 154

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
 Frame = +1

Query: 229 FTKYFKKYYIIGIF----AYFATIIYHG-----MYIPLQN--IIRLIFSKNIYEVEKLIL 375
           ++KYFK+Y++I +F    A F  +I+H      +Y  L N   + +++  N+   +K I 
Sbjct: 24  YSKYFKRYFLIALFLNFLALFLGLIFHKYLDEFLYFILVNSSYLSVVYRGNLKLNDKYI- 82

Query: 376 LSRVEKNYIIAGFSLFLL-VVTFAVK 450
           L  + K ++    +LFL+ +V ++ K
Sbjct: 83  LKHLIKAFVFLSLALFLIFIVAYSFK 108


>UniRef50_Q0W7B8 Cluster: Putative uncharacterized protein; n=2;
           Archaea|Rep: Putative uncharacterized protein -
           Uncultured methanogenic archaeon RC-I
          Length = 613

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +1

Query: 247 KYYIIGIFAYFATIIYHGMYIPLQNIIRLIFSKNIYEVEKLILLSRVEKNYIIAGFSLFL 426
           KYY++ + A  A IIYH + IP   ++ L+    +Y++      S +  +Y+I   ++ L
Sbjct: 223 KYYLLALLATLAIIIYHTVSIPYV-LVMLLLMYLLYQIFAKEEKSPITYSYLIIASAMTL 281

Query: 427 L 429
           L
Sbjct: 282 L 282


>UniRef50_Q018C1 Cluster: Chromosome 05 contig 1, DNA sequence; n=2;
           Ostreococcus|Rep: Chromosome 05 contig 1, DNA sequence -
           Ostreococcus tauri
          Length = 527

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = +1

Query: 457 LSYTASLAEICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFA 618
           + +   LAE+ RRS   V    + +++ ++S + +L+ L R++R   YET++ +
Sbjct: 363 IKHQDELAEVRRRSSHAVAVANTTEQELLLSRDRLLSELARMRRE-GYETVLLS 415


>UniRef50_Q0LMY6 Cluster: Chemotaxis sensory transducer; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep: Chemotaxis
           sensory transducer - Herpetosiphon aurantiacus ATCC
           23779
          Length = 499

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 19/83 (22%), Positives = 39/83 (46%)
 Frame = +1

Query: 253 YIIGIFAYFATIIYHGMYIPLQNIIRLIFSKNIYEVEKLILLSRVEKNYIIAGFSLFLLV 432
           +I+G+ A +  I+ +G+ I L   + L+F  N+   +   L +         G  LF + 
Sbjct: 120 FIVGLVATWREIVSYGVTITLAYGLLLLFKSNLESFQVTTLTAANNAGVYGVGAVLFFVG 179

Query: 433 VTFAVKALLSYTASLAEICRRSE 501
           +   +     ++ +LAE  ++SE
Sbjct: 180 LATTIVLTTIFSRALAEYSQKSE 202


>UniRef50_Q015J5 Cluster: 5-alpha-taxadienol-10-beta-hydroxylase;
           Tm10bh; n=2; Ostreococcus|Rep:
           5-alpha-taxadienol-10-beta-hydroxylase; Tm10bh -
           Ostreococcus tauri
          Length = 738

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = -2

Query: 580 RVANWLVCFRXKSFFSLSSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQL 401
           RV  +   F+   FF  +        VR F  F+ +LP  +A  LP   R + TE     
Sbjct: 313 RVERYGPTFKTAMFFKPAVVFGSKDAVREFLTFEAELPADEA--LPETFRELHTEYGALR 370

Query: 400 YSSFRHDSARLVFR 359
            S  RH + R  F+
Sbjct: 371 MSGKRHQATRANFK 384


>UniRef50_Q6CKU7 Cluster: Similar to sgd|S0005394 Saccharomyces
           cerevisiae YOL034w; n=1; Kluyveromyces lactis|Rep:
           Similar to sgd|S0005394 Saccharomyces cerevisiae YOL034w
           - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 1119

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +3

Query: 51  QNVEIFIKNKTNNALI*KIIKNGPQLHHS*LHSVPTNDPVVGYAKSYLRCPSRHPQYQL 227
           + VE +IKN T+  +I   +KN   L HS  + + T+D VV + K  L    +  +Y +
Sbjct: 115 KKVEEYIKNGTDEGVIEITLKNSSALLHSDFNMINTDDDVV-HVKRVLSMEKKKSKYYI 172


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,799,664
Number of Sequences: 1657284
Number of extensions: 11175079
Number of successful extensions: 27011
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27004
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)