Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n09
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    25   0.51 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    25   0.51 
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    25   0.51 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.0  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 RSSKALPSKHAVWHSLVLATHTHELVSS 563
           RSSK++ S  AVW  +VLA    E+ SS
Sbjct: 4   RSSKSI-STQAVWVCMVLAVVFQEITSS 30


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 RSSKALPSKHAVWHSLVLATHTHELVSS 563
           RSSK++ S  AVW  +VLA    E+ SS
Sbjct: 4   RSSKSI-STQAVWVCMVLAVVFQEITSS 30


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 480 RSSKALPSKHAVWHSLVLATHTHELVSS 563
           RSSK++ S  AVW  +VLA    E+ SS
Sbjct: 4   RSSKSI-STQAVWVCMVLAVVFQEITSS 30


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 356 KCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYH 472
           KC  G + P+    I+E L   C++ G +  +     YH
Sbjct: 285 KCPPGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYH 323


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 417 FSARIQEQSRRF*EAYVITSTRSSKALPS 503
           F   +QE  + F   YV++ T S+  LPS
Sbjct: 156 FVKLLQEMKQAFGSKYVLSVTVSANPLPS 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,479
Number of Sequences: 336
Number of extensions: 3138
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)