Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n08
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    27   0.17 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.52 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.4  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +1

Query: 220 WFYIRSARGGLHLVANGHIFYEDGGSHPRRVTWRCARSYQKAERCQVALCLRDGRL 387
           W ++ +A GG  LV+  H     G      VTW   +     ++C   L   +G L
Sbjct: 316 WLHVDAAWGGGALVSAKHRHLLKGIERADSVTWNPHKLLTAPQQCSTLLLRHEGVL 371


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 509 PSSLLRRAACTDAIGSTWN 453
           P++ L+ +ACTD + S W+
Sbjct: 24  PNATLQSSACTDDLSSCWS 42


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 382 RLVYFRGSHNHPA 420
           RLVYF+  + HP+
Sbjct: 321 RLVYFQNEYEHPS 333


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 295 SHPRRVTWRCARSYQKAER 351
           SHP + TW+C    Q+ ER
Sbjct: 51  SHPPQWTWQCIN--QRCER 67


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +1

Query: 316 WRCARSYQKAERCQVAL 366
           W+C   Y + +RC   L
Sbjct: 174 WQCQGGYPRLQRCPAML 190


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 554 QASSLYQYPLIFNNCPSSLLRRAACTDAIGSTWNFL 447
           QASS   +PL+ NN    L+  +    ++G   NF+
Sbjct: 227 QASSFVVWPLVENNPTLYLIPVSVILISVGWWENFV 262


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 554 QASSLYQYPLIFNNCPSSLLRRAACTDAIGSTWNFL 447
           QASS   +PL+ NN    L+  +    ++G   NF+
Sbjct: 227 QASSFVVWPLVENNPTLYLIPVSVILISVGWWENFV 262


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 123 AWIKGFSK*KFTFSLAQYNHLF 58
           A IK FSK +F   + Q  H F
Sbjct: 182 ALIKAFSKYQFVVLVLQLQHRF 203


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 123 AWIKGFSK*KFTFSLAQYNHLF 58
           A IK FSK +F   + Q  H F
Sbjct: 182 ALIKAFSKYQFVVLVLQLQHRF 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,087
Number of Sequences: 336
Number of extensions: 3184
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)