Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8n07
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           28   0.22 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   0.38 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   0.87 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.1  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -1

Query: 296 TSLTIGRPVHTWRRTVESEMRTANVTWSDVKEQAQDRVKWRQLARALSTSGVP 138
           T +  G+    +RRT   + R   V   DVK  A +   W+ +A AL   GVP
Sbjct: 609 TVIEAGQSAMRFRRTNGRDNRFLLVVSMDVKN-AFNTASWQAIATALQMKGVP 660


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 281 GRPVHTWRRTVESEMRTANVTWSDVKEQAQDRVKWRQLARALSTSGVP 138
           GR   ++RRT   + R   V   D+   A +   W+ +A AL   GVP
Sbjct: 561 GRRAKSFRRTNHRDKRCLMVVALDICN-AFNTASWQSIADALRNKGVP 607



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 258 SPSVYRATNSKTRYSRSNQHAPARPPPMVVTPTP 359
           SP++       ++ +RS Q +P R PP+    TP
Sbjct: 208 SPALAARRVKLSQRNRSQQRSPRRDPPINRQHTP 241


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 281 GRPVHTWRRTVESEMRTANVTWSDVKEQAQDRVKWRQLARALSTSGVP 138
           GR   +  RT   + R   V   DV+  A +   W+ +A AL   GVP
Sbjct: 556 GRRALSLGRTNNRDRRCLMVVALDVRN-AFNTASWQSIAEALQAKGVP 602


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 281 GRPVHTWRRTVESEMRTANVTWSDVKEQAQDRVKWRQLARALSTSGVP 138
           G+   ++ +T   + R   V   DV+  A +   W+ +A AL   GVP
Sbjct: 566 GKASRSFGQTNNRDKRCLMVVALDVRN-AFNTASWQSIANALREKGVP 612


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 486 QALPRDYQLGSEPNGPCAYEISQFLQCASSRDNLQEC 596
           ++LPR Y + S+  G C  E   F     + DN   C
Sbjct: 506 KSLPRLYSVDSKTCGDCHQECKDFCY-GPNEDNCGSC 541


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 261 PSVYRATNSKTRYSRSNQHAPARPPPMVVTP 353
           P   R    + +  RS Q  PA+P  + V+P
Sbjct: 473 PQQQRPQQQRPQQQRSQQRKPAKPELIEVSP 503


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 156 IYQRGTLGLPPRRDDILI 103
           +  R T+ LPPR+D + I
Sbjct: 575 LLSRNTVALPPRKDTVSI 592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,431
Number of Sequences: 2352
Number of extensions: 10712
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)