Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8m22
(464 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 131 6e-32
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 44 1e-05
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 36 0.002
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 34 0.012
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 33 0.021
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 30 0.15
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 29 0.26
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 29 0.35
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 28 0.61
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 0.61
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 28 0.81
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 27 1.1
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 27 1.1
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 26 2.5
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 2.5
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 25 5.7
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 25 7.5
SPAC664.05 |rpl13||60S ribosomal protein L13|Schizosaccharomyces... 25 7.5
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 24 9.9
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 131 bits (316), Expect = 6e-32
Identities = 64/107 (59%), Positives = 83/107 (77%), Gaps = 1/107 (0%)
Frame = +1
Query: 103 RLP-RVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVI 279
RLP R+ + + + R YAKD++FG D RA +L GVD LA AV+VT+GPKGRNV+
Sbjct: 11 RLPLRIAGRRIPGRFAVPQVRTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVL 70
Query: 280 LEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAG 420
++Q +GSPKITKDGVTVA+ V LKDKF+N+GA+LVQ+VA+ TNE AG
Sbjct: 71 IDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 187 GADVRALMLQGVDILADAVAVTMGPKGRNVILE-QSWGSPKITKDGVTVAKGVELKDKFQ 363
G + R G + D V T+GPKG + IL+ S G +T DG T+ K + L
Sbjct: 18 GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIAL----D 73
Query: 364 NIGAKLVQNVANNTNEEAG 420
N AK++ N++ ++E G
Sbjct: 74 NAAAKVLVNISKVQDDEVG 92
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 36.3 bits (80), Expect = 0.002
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 193 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIG 372
+VR + +ADA+ ++GPKG + +++ G +T DG T+ K + + +
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSV----LHPA 74
Query: 373 AKLVQNVANNTNEEAG 420
AK++ +++ + EAG
Sbjct: 75 AKMLVDLSAAQDVEAG 90
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 33.9 bits (74), Expect = 0.012
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 187 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 366
G D + +A+ V ++GP+G + IL G +T DG T+ +E++ +
Sbjct: 32 GIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI-- 89
Query: 367 IGAKLVQNVANNTNEEAG 420
AKL+ ++ + ++E G
Sbjct: 90 --AKLLVQLSKSQDDEIG 105
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 33.1 bits (72), Expect = 0.021
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +1
Query: 187 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 366
G DVR + +A+ V ++GP G + +L G +T DG T+ + L D
Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHP 75
Query: 367 IGAKLVQNVANNTNEEAG 420
G LV+ +A ++E G
Sbjct: 76 AGKVLVE-LAQQQDKEVG 92
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 30.3 bits (65), Expect = 0.15
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 211 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 390
+Q +AD + +GP+ +L GS +T DG + + +E+ + AK +
Sbjct: 25 IQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEV----AHPAAKSMIE 80
Query: 391 VANNTNEEAG 420
+A +EE G
Sbjct: 81 LARTQDEEVG 90
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 29.5 bits (63), Expect = 0.26
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 235 DAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEE 414
D + T+GP G + ++ G I+ DG T+ K +++ + AK + ++A + E
Sbjct: 38 DTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDI----VHPAAKTLVDIARAQDAE 93
Query: 415 AG 420
G
Sbjct: 94 VG 95
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 29.1 bits (62), Expect = 0.35
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 268 RNVILEQSWGSPKITKDGVTVAK-GVELKDKFQNIGAKLV 384
R VI ++ S +T G T G+ELKD+F+ +G K++
Sbjct: 542 RKVIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL 581
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 28.3 bits (60), Expect = 0.61
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 229 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAK 378
L D + +GP G +L G+ K+TKDG + +++++ + AK
Sbjct: 28 LQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAK 77
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 0.61
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = -1
Query: 422 LPASSLVLLATFCTNLAPMFWNLSLSSTPLATVTPSFVIFGDPQDCSRITFLPFGPIVTA 243
+ +SSL +T ++LA N + S+TP ++ T S + + + + L + +
Sbjct: 144 ITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNST 203
Query: 242 TASARMSTPCSMRALTSAPNLTSLA 168
T++ S+ S A +++ +SLA
Sbjct: 204 TSATATSSSLSSTAASNSATSSSLA 228
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 27.9 bits (59), Expect = 0.81
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 288 LFQNNVSTFWTHCNGYGIS*DVNALQHESSYISAKPHIFGI 166
++ N +S T +G+GI +++ + E SAK H+FGI
Sbjct: 225 IYPNTLSVLRTRASGFGIKIELDNITPELITKSAK-HVFGI 264
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 27.5 bits (58), Expect = 1.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 106 LPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAV 243
+P V++ + ++ Y+L+ F+ R+ V LQGV + AD V
Sbjct: 140 VPSVLKAPIFIY--YRLTNFFQNHRRYAKSVDEKQLQGVALTADEV 183
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 27.5 bits (58), Expect = 1.1
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 229 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 408
L++ ++GP G+N I+ +T D T+ + +E+ + AKLV +
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEV----IHPAAKLVVDATQQQE 93
Query: 409 EEAG-RRNYHCYXTG 450
E G N+ TG
Sbjct: 94 NELGDAANFVVVFTG 108
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 2.5
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -2
Query: 190 RQTSHLWHKILKVDMIYGEKQFDEQHEVDATFLKIVLILAVF 65
RQT+ +W + V F H +ATF ++L + F
Sbjct: 166 RQTNIVWMVFIAVTYFASNMSFFNPHLAEATFADVLLTIISF 207
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 26.2 bits (55), Expect = 2.5
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = -1
Query: 392 TFCTNLAPMFWNLSLSSTPLATVTPSFVIFGD--PQDCSR-----ITF-LPFGPIVTATA 237
T T L P F NL SS+ T F+ D ++ SR I F + + P+V+
Sbjct: 126 TEITLLPPTFHNLIPSSSSYETAVAEFLHMEDLLQENVSRELECQICFGMLYDPVVSPCG 185
Query: 236 SARMSTPCSMRALTSAP 186
PC M+ALT +P
Sbjct: 186 HT-FCGPCLMQALTQSP 201
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 5.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -1
Query: 332 ATVTPSFVIFGDPQDCSRITFLPFGPIVTATASARMSTPCSMRALTSAPNLTSL 171
A+V P P ++ L P+ A SAR S+ S ++ + P+L +L
Sbjct: 539 ASVRPITAAVFAPTKTKQLLTLSGDPVYLAAISARRSSVISNASIETGPSLRNL 592
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 80 QNNF*KCCVYLVLFVKLFL 136
Q+NF C +Y + FV+LFL
Sbjct: 552 QSNFSDCGIYALHFVELFL 570
>SPAC664.05 |rpl13||60S ribosomal protein L13|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 208
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 270 KRYSGTILGVPEDHKRRRNSRQ 335
+R + TI G+P DH+RR S +
Sbjct: 87 RRVASTI-GIPVDHRRRNRSEE 107
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1073
Score = 24.2 bits (50), Expect = 9.9
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 316 DGVTVAKGV-ELKDKFQNIGAKLVQNVANNT 405
D T G+ ++ +KFQN ++++ +NNT
Sbjct: 704 DSFTCVSGIYDIPNKFQNSESRIIVYYSNNT 734
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,758,273
Number of Sequences: 5004
Number of extensions: 34112
Number of successful extensions: 110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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