Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m19
         (474 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical pr...    28   3.9  
U49947-1|AAA93420.2|  232|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z71262-7|CAA95811.2|  368|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AC006833-9|AAF60943.1|  318|Caenorhabditis elegans Saposin-like ...    27   9.1  

>Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical
           protein T23F1.6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 347 SSNDACAQMQYCDYGYKEDYYEIRNSYPTDNAINN 451
           ++ D   QMQY  Y  + + Y+ +N Y   N I N
Sbjct: 161 NNQDPYNQMQYGGYNQQGNQYQNQNQYQNPNQIQN 195


>U49947-1|AAA93420.2|  232|Caenorhabditis elegans Hypothetical
           protein C30G4.2 protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 344 VSSNDACAQMQYCDYGYKEDYYEIRNSYPTDNAIN 448
           V+  D C    +C+Y  KED +E+   Y     IN
Sbjct: 174 VTMIDICHHKFWCNYQLKEDLFEVAKLYEFPFVIN 208


>Z71262-7|CAA95811.2|  368|Caenorhabditis elegans Hypothetical
           protein F22D6.9 protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 70  EFILRKTLKIKCSAPFHCGQLNRSFTLL 153
           EF   + L    SAPF+CGQ N   ++L
Sbjct: 308 EFFADRKLVTIFSAPFYCGQTNNIASML 335


>AC006833-9|AAF60943.1|  318|Caenorhabditis elegans Saposin-like
           protein family protein7 protein.
          Length = 318

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 341 DVSSNDACAQMQYCD 385
           D+SS D C +M +CD
Sbjct: 106 DISSKDVCVRMNFCD 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,027,564
Number of Sequences: 27780
Number of extensions: 163508
Number of successful extensions: 390
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)