Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m14
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    27   0.17 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    27   0.17 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.9  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.6  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 13/60 (21%), Positives = 28/60 (46%)
 Frame = +1

Query: 376 YTPSESVPNLTNRFASFSTSETPSTANNYNSQYHLDTNVASQSVLNDIDESFSRQTSYRY 555
           Y   E  PN  N   +   S    +++NYNS +   ++ +SQ+ +    E+ +  + + +
Sbjct: 449 YISPEVFPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSSDFNF 508


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 13/60 (21%), Positives = 28/60 (46%)
 Frame = +1

Query: 376 YTPSESVPNLTNRFASFSTSETPSTANNYNSQYHLDTNVASQSVLNDIDESFSRQTSYRY 555
           Y   E  PN  N   +   S    +++NYNS +   ++ +SQ+ +    E+ +  + + +
Sbjct: 397 YISPEVFPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSSDFNF 456


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 431 VEKLANLFVKLGT 393
           VE  ANL+VKLGT
Sbjct: 310 VEHAANLWVKLGT 322


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 440 HQALQIITTHNIIWTQMWHHNQY 508
           HQ  Q+     +   QMWHH+ +
Sbjct: 33  HQGAQMGPEQQMWEPQMWHHHSH 55


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 440 HQALQIITTHNIIWTQMWHHNQY 508
           HQ  Q+     +   QMWHH+ +
Sbjct: 33  HQGAQMGPEQQMWEPQMWHHHSH 55


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +1

Query: 238 LPIINVWTTEYNKRP 282
           +P++ +W++  +KRP
Sbjct: 449 IPLVIIWSSNLSKRP 463


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 80  MSVFKLSINYHHHLQ 124
           MS +  S ++HHHLQ
Sbjct: 45  MSPYASSQHHHHHLQ 59


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 529 FSRQTSYRYYRHQQ 570
           + +QT  R+YRH++
Sbjct: 555 YVKQTERRFYRHRE 568


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 97  ELKNRHNVTSNCAANNLQF 41
           ++KN +++ S CA N + F
Sbjct: 99  KIKNMYSLISECAENFVDF 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,290
Number of Sequences: 336
Number of extensions: 2984
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)