Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m14
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.0  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   4.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 214 IKKDTPSGLPIINV 255
           I +DTPSGLP++ V
Sbjct: 750 IPEDTPSGLPVLRV 763


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +1

Query: 277  RPRSQPFGVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETPSTAN 456
            RP+S    +N   S N E   G   +  G     TP++  P+   R  S S S    T N
Sbjct: 991  RPQSLSLSMNSMGSDNSEQSSGGRLSSGGGPPVGTPTDGAPS-EGRRLSHSKSWPKGTEN 1049

Query: 457  -NY 462
             NY
Sbjct: 1050 ENY 1052


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = +1

Query: 208 KYIKKDTPSGLPIINVWTTEYNKRP-RSQPFGVNDGISQNHENKFGKAQTMSGHAGKYTP 384
           +Y++ +     P          +RP R    G     SQ     FGKA  M+G A +   
Sbjct: 212 RYVQYEVGESSPPTRDRAARRGQRPARVSKAGTRWKTSQFDSQLFGKALAMTGFARQVNS 271

Query: 385 SES-VPNLTN 411
            ES V +LT+
Sbjct: 272 VESLVESLTS 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,714
Number of Sequences: 2352
Number of extensions: 11038
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)