Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8m14
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical p... 28 4.9
Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical p... 28 4.9
Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear recep... 28 4.9
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 28 6.4
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 28 6.4
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 130 NNNKKNDLREMISRKGQKAVNEG---VVGKYIKKDTPSGLPIINVWTTEYNKRPRSQPFG 300
NNN D R+ I+ G VVGK +K PI+++W + +++P
Sbjct: 13 NNNSGEDYRKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRD-SRKPGDLSPS 71
Query: 301 VNDGISQNHEN 333
+ + I+ HEN
Sbjct: 72 IAETINSTHEN 82
>Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical
protein F16D3.2 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 310 GISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETPSTANNYNSQYHLDTN 489
GI +NH G Q+ H G + P N + F P+ +N+Y+ L
Sbjct: 116 GIPRNHNQTHGFRQSAPAHRGHHRPPAG--NHGSSFRPNLNISQPNPSNDYSKMTGLHYP 173
Query: 490 VASQSVL---NDIDESFSRQTSYRYYRHQQ 570
V S++VL N + FS Q R H++
Sbjct: 174 V-SRNVLASNNGSNSRFSNQPPRREDHHEK 202
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 301 VNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETPSTANNYNS 468
++ S + + ++ T S + KY+PS PN++ + ST T S +S
Sbjct: 13 LSSSCSSIRSSNYSRSYTPSFNTFKYSPSSYTPNISRNLNTTSTGSTTSDTPKLSS 68
>Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 GVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETP-STANNYNSQ 471
G++ Q+ +K K S + G +P + S STS+TP S+ N+YN Q
Sbjct: 215 GMDARAVQSERDKHKKNPKDSNNEGSTSPQYPTASTPISIPSTSTSQTPTSSVNSYNFQ 273
>Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 GVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETP-STANNYNSQ 471
G++ Q+ +K K S + G +P + S STS+TP S+ N+YN Q
Sbjct: 197 GMDARAVQSERDKHKKNPKDSNNEGSTSPQYPTASTPISIPSTSTSQTPTSSVNSYNFQ 255
>Z68217-11|CAE46673.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 GVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETP-STANNYNSQ 471
G++ Q+ +K K S + G +P + S STS+TP S+ N+YN Q
Sbjct: 215 GMDARAVQSERDKHKKNPKDSNNEGSTSPQYPTASTPISIPSTSTSQTPTSSVNSYNFQ 273
>Z68217-10|CAC70099.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 GVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETP-STANNYNSQ 471
G++ Q+ +K K S + G +P + S STS+TP S+ N+YN Q
Sbjct: 197 GMDARAVQSERDKHKKNPKDSNNEGSTSPQYPTASTPISIPSTSTSQTPTSSVNSYNFQ 255
>Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical
protein F58G6.5a protein.
Length = 499
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 GVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETP-STANNYNSQ 471
G++ Q+ +K K S + G +P + S STS+TP S+ N+YN Q
Sbjct: 83 GMDARAVQSERDKHKKNPKDSNNEGSTSPQYPTASTPISIPSTSTSQTPTSSVNSYNFQ 141
>AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear receptor
NHR-34 protein.
Length = 509
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 298 GVNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETP-STANNYNSQ 471
G++ Q+ +K K S + G +P + S STS+TP S+ N+YN Q
Sbjct: 93 GMDARAVQSERDKHKKNPKDSNNEGSTSPQYPTASTPISIPSTSTSQTPTSSVNSYNFQ 151
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
F31D5.5 protein.
Length = 1788
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 172 KGQKAVNEGVVGKYIKKDTPSGLPIINVWTTEYNKRPRSQPFGVNDGISQNHE 330
K +K + G+ I G +++++ EY PR G DG+S+ H+
Sbjct: 1020 KNKKCDGSFMKGQSINVTIYRGEQVLDLFDFEYTDIPRIVVLGCEDGLSEYHD 1072
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 172 KGQKAVNEGVVGKYIKKDTPSGLPIINVWTTEYNKRPRSQPFGVNDGISQNHE 330
K +K + G+ I G +++++ EY PR G DG+S+ H+
Sbjct: 989 KNKKCDGSFMKGQSINVTIYRGEQVLDLFDFEYTDIPRIVVLGCEDGLSEYHD 1041
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 27.5 bits (58), Expect = 8.5
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Frame = +1
Query: 124 VLNNNKKNDLREMISRKGQKAVNEGVVGKYIKKDTPSGLPIINVWTTE-YNKRPRSQPFG 300
++N+N+ DL E S + + + K +D+ P +++ Y+ RS
Sbjct: 468 IVNSNESEDLEE--SGEEIQIETTTLKRKVFSEDSMENTPPNFFYSSNRYDSTTRSNYVA 525
Query: 301 VNDGISQNHENKFGKAQTMSGHAGKYTPSESVPNLTNRFASFSTSETPSTANNYNSQYHL 480
N + + E T+ G T S + L+ S+ T+ETP + + L
Sbjct: 526 DNLDLEDSEEPLEIDTSTLFGVE---TTSNEIIELSTSTISYKTTETPKKTTSGKPKPWL 582
Query: 481 DTNVASQSVLN----DIDESFSRQTSYR 552
V + +LN D+D+ R+ R
Sbjct: 583 HGGVIVKPILNFDQLDVDQDEQRERENR 610
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,193,800
Number of Sequences: 27780
Number of extensions: 253544
Number of successful extensions: 691
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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