Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m12
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    36   4e-04
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 211 ERSSNICSRTPCIRG-ICTQTIQDPGFTCKCEGTGYYGKRCE 333
           E   N C+ +PC  G +CT TI   G  C C   G+YGK CE
Sbjct: 336 ESKVNFCATSPCQNGGVCT-TIH-AGHKCTCP-EGFYGKNCE 374



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
 Frame = +1

Query: 73  QLGVWACEPNQAQNG--CKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPC 246
           +L V  C+PN  QNG  C    NS SC   C +          L  + E + + C    C
Sbjct: 220 ELNVDDCKPNPCQNGGTCHDLVNSFSC--SCPS--------GTLGYICEINVDDCRPGAC 269

Query: 247 -IRGICTQTIQDPGFTCKCEGTGYYGKRCE 333
              G C   +   GF CKC   G+ G RCE
Sbjct: 270 HNNGTCLDKV--GGFECKCP-PGFVGPRCE 296



 Score = 31.1 bits (67), Expect = 0.008
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 223 NICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRC 330
           N+C  +PC+ G   Q      +TC C   GY GK C
Sbjct: 63  NLCDSSPCLNGATCQD-HTTHYTCHCP-YGYTGKDC 96



 Score = 25.0 bits (52), Expect = 0.53
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +1

Query: 211 ERSSNICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCE 333
           E S   C   PC  G   +     G+ C C  +G  G  CE
Sbjct: 374 EFSGYDCDSNPCQNGGVCRISDGGGYICDCP-SGTNGTNCE 413


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 232 SICLNFSLLVHSNKNVLSYKC 170
           +IC+N + LV SN+NV   KC
Sbjct: 730 AICVNATSLVESNRNV-PQKC 749


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 IFYIPNCVSQSCVGYNKFQLTVN 525
           +FY+   V    VGY +F + +N
Sbjct: 93  VFYVVTTVLVVLVGYERFDILLN 115


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 IFYIPNCVSQSCVGYNKFQLTVN 525
           +FY+   V    VGY +F + +N
Sbjct: 93  VFYVVTTVLVVLVGYERFDILLN 115


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 593 IFYIPNCVSQSCVGYNKFQLTVN 525
           +FY+   V    VGY +F + +N
Sbjct: 93  VFYVVTTVLVVLVGYERFDILLN 115


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 219 FKHMLSYALHSWHMHADNP 275
           F+  L   LH WH H   P
Sbjct: 197 FREDLGINLHHWHWHLVYP 215


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/60 (18%), Positives = 23/60 (38%)
 Frame = -1

Query: 283 RDPGLSACICHECKAYESICLNFSLLVHSNKNVLSYKCTQFYNRNHNCTSYRIFCTHSEP 104
           RD   +  +C+    Y+ +  N        K     +C + + R+H+  ++    T   P
Sbjct: 131 RDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERP 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,068
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)