Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m10
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.69 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   4.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 267  LFIILQKCSRFW*MLGYITFLS**NLLTIICLYSIWF 157
            L ++LQ     W  LGY+ F+S      ++C+  + +
Sbjct: 894  LCVVLQLQENDWLQLGYLIFVSTLYTANVVCICHVCY 930


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 159 FCCDNAFNI 133
           +CCDN FN+
Sbjct: 161 YCCDNNFNV 169


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 180 ICLYSIWFCCDNAFNILK*QLSSYYT-YWAF 91
           IC+   ++C D+ FN        Y+T  WAF
Sbjct: 246 ICITQFYYCYDSGFNSDN-LTDVYFTLQWAF 275


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 305 LLKCTVPKRTTVACLSF 255
           LL C+ PK+  V C+ F
Sbjct: 27  LLSCSFPKKKLVYCIIF 43


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 305 LLKCTVPKRTTVACLSF 255
           LL C+ PK+  V C+ F
Sbjct: 23  LLSCSFPKKKLVYCIIF 39


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 100 ICVIARQLLFKNIESIVTAKPNTVQTYYSQKVLLRK 207
           IC  A QLLF N++ + +    T      Q +LL +
Sbjct: 199 ICESAAQLLFMNVQWVRSIPAFTCLPLSDQLLLLEE 234


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 227 IYQNLLHFCKMINK 268
           IY  L+  CK INK
Sbjct: 217 IYSQLVFMCKKINK 230


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 575 YALRNSPPGATPSSLAISAYVLSSMAWSIP 486
           Y LRN  P   PS+       L SM  S+P
Sbjct: 198 YGLRNYGPEPVPSTPYPPPGSLGSMGVSVP 227


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 358 YHWDSVSLLSLKHLQ*TVY*SALYPKERP 272
           + W  + L++   LQ  VY   ++ K RP
Sbjct: 199 FGWPFLLLITFTSLQIMVYLQHIFVKSRP 227


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 358 YHWDSVSLLSLKHLQ*TVY*SALYPKERP 272
           + W  + L++   LQ  VY   ++ K RP
Sbjct: 199 FGWPFLLLITFTSLQIMVYLQHIFVKSRP 227


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 358 YHWDSVSLLSLKHLQ*TVY*SALYPKERP 272
           + W  + L++   LQ  VY   ++ K RP
Sbjct: 519 FGWPFLLLITFTSLQIMVYLQHIFVKSRP 547


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 200 NRTF*L*YVCTVFGFAVTMLSIFL 129
           N T+ L  +  VF FAVT  S ++
Sbjct: 27  NPTYRLYKIFVVFSFAVTFFSAWI 50


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 100 ICVIARQLLFKNIESIVTAKPNTVQTYYSQKVLLRK 207
           IC  A QL+F N++ + +    T      Q +LL +
Sbjct: 199 ICESAAQLIFMNVQWVRSIPAFTCLPLSDQLLLLEE 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,465
Number of Sequences: 336
Number of extensions: 3646
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)