Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m09
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.0  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   6.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.7  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 272 KREAVAIPAYTALKPLKGCPCGNSGPC 352
           KR   AI +  A+KP   C  G SG C
Sbjct: 31  KRSKFAI-SENAVKPCVSCGPGQSGQC 56


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 87  FGHFVLIIFSLSFSVFAYKFDCLDVQLSI 1
           FGH +L++F +SF +       L V L +
Sbjct: 872 FGHGLLLMFGISFLLVTQTIFALCVVLQL 900



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/18 (33%), Positives = 15/18 (83%)
 Frame = +3

Query: 381 QYIIRRKKRNFPHSAQNL 434
           QY+++++ +NF HS +++
Sbjct: 362 QYVMQQQVKNFRHSVRSV 379


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +3

Query: 366  RPKESQYIIRRKKRNFPHSAQNLDGTYR 449
            +P   + +   + +N  H A+NLD   +
Sbjct: 1250 KPTSQKIVPNLRNQNLSHQAKNLDSNLK 1277


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 372 KESQYIIRRKKRNFPHSAQNLDGTYRGKLK 461
           K S+Y I+RK+  F    +  +G+  G+ K
Sbjct: 58  KSSKYPIKRKRVRFQTRVKVQEGSKSGRNK 87


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 440 NIPGKTEKGPYAPN 481
           N P K+   PY PN
Sbjct: 63  NTPNKSSTSPYPPN 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,809
Number of Sequences: 336
Number of extensions: 3620
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)