Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8m07
(279 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 1.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 1.6
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 21 2.8
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 3.7
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 3.7
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 3.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.7
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 20 6.5
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 20 6.5
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 20 6.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 6.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 19 8.6
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 1.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 56 HCYSPTKPTHC 24
H YS T P+HC
Sbjct: 184 HTYSETGPSHC 194
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 1.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 179 SQNFHIFIFYEQFLDN 132
S+N H+F+ +QF+ N
Sbjct: 553 SKNQHLFVELDQFIQN 568
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.0 bits (42), Expect = 2.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 178 EKTFSCIHC 204
EK FSC HC
Sbjct: 68 EKPFSCQHC 76
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 3.7
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 34 GLVGL*QCLCSPIYFCRQITNSKII 108
GLV Q +CSP F + S+++
Sbjct: 146 GLVNNTQPMCSPKLFAFDLNTSQLL 170
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 20.6 bits (41), Expect = 3.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 184 TFSCIHCKLYNSVLLFHLNI 243
++SC++ + NS L H N+
Sbjct: 23 SYSCVNKSMLNSHLKSHSNV 42
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 20.6 bits (41), Expect = 3.7
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 34 GLVGL*QCLCSPIYFCRQITNSKIILRL 117
GL+ Q +CSP + SK++ ++
Sbjct: 145 GLINNIQLMCSPKLLAFDLNTSKLLKQI 172
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 3.7
Identities = 4/16 (25%), Positives = 13/16 (81%)
Frame = -2
Query: 107 IILLFVIWRQKYIGEQ 60
++++ + WR +Y+G++
Sbjct: 1628 VVIVALRWRSRYLGDR 1643
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 3.7
Identities = 4/16 (25%), Positives = 13/16 (81%)
Frame = -2
Query: 107 IILLFVIWRQKYIGEQ 60
++++ + WR +Y+G++
Sbjct: 1624 VVIVALRWRSRYLGDR 1639
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 19.8 bits (39), Expect = 6.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 34 GLVGL*QCLCSPIYFCRQITNSKII 108
GLV Q +CSP +T S+++
Sbjct: 141 GLVNNTQPMCSPKLLTFDLTTSQLL 165
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 19.8 bits (39), Expect = 6.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 34 GLVGL*QCLCSPIYFCRQITNSKII 108
GLV Q +CSP +T S+++
Sbjct: 141 GLVNNTQPMCSPKLLTFDLTTSQLL 165
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 19.8 bits (39), Expect = 6.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 34 GLVGL*QCLCSPIYFCRQITNSKII 108
GLV Q +CSP +T S+++
Sbjct: 141 GLVNNTQPMCSPKLLTFDLTTSQLL 165
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.8 bits (39), Expect = 6.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 39 GWAVAMSLFSYIFLSPNHK 95
G+A MS SY SPN K
Sbjct: 131 GYASPMSTSSYDPYSPNSK 149
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 19.4 bits (38), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 34 GLVGL*QCLCSPIYFCRQITNSKII 108
GLV Q +CSP + SK++
Sbjct: 147 GLVNNNQPMCSPKLLTFDLKTSKLV 171
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,539
Number of Sequences: 438
Number of extensions: 1473
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5369883
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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