Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m04
         (478 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF7 Cluster: Putative secreted peptide 30; n=1; Lono...    33   3.3  
UniRef50_Q11SZ6 Cluster: Cytochrome oxidase assembly protein; n=...    33   4.3  
UniRef50_A6L1Z4 Cluster: Putative collagenase; n=1; Bacteroides ...    31   10.0 

>UniRef50_Q5MGF7 Cluster: Putative secreted peptide 30; n=1; Lonomia
           obliqua|Rep: Putative secreted peptide 30 - Lonomia
           obliqua (Moth)
          Length = 62

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 15  MSLKTLVFCVCVTLASAAIQRSALEPIPDKFSGLQGCYIREFDGVLPF 158
           M  K  +  + + +A+AA     L   P + +  +GCY+ E + V+PF
Sbjct: 1   MVSKIFIISLVICMANAATWMGMLPKKPKQLAHKEGCYVEEINDVVPF 48


>UniRef50_Q11SZ6 Cluster: Cytochrome oxidase assembly protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Cytochrome
           oxidase assembly protein - Cytophaga hutchinsonii
           (strain ATCC 33406 / NCIMB 9469)
          Length = 327

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -1

Query: 325 GFVQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGR 149
           G +    + S    +L+ +H GV++L   +  W +  +  +K R+H+A  +Y  E  GR
Sbjct: 129 GLLGAKLVSSYLKPILITLHMGVALLIMGILIWLLVEAGKEKQRLHAA--DYAEEDLGR 185


>UniRef50_A6L1Z4 Cluster: Putative collagenase; n=1; Bacteroides
           vulgatus ATCC 8482|Rep: Putative collagenase -
           Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC
           11154)
          Length = 609

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 341 VIVLTRLC-SKNADCVTFFFCFGKGTYRGVCAQLIFTRLVYDSI 213
           V V   LC S +  C     CFG+   RG CAQ  F RL +D +
Sbjct: 162 VFVHGALCVSYSGQCYVSQACFGRSANRGECAQ--FCRLAFDMV 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,838,079
Number of Sequences: 1657284
Number of extensions: 8141640
Number of successful extensions: 20496
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20496
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)