Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8m04
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 30 1.1
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 30 1.1
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421... 30 1.1
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637 30 1.1
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 30 1.1
01_07_0227 + 42144437-42144446,42145059-42145428,42145528-421456... 30 1.1
07_03_0457 - 18404577-18405193,18405317-18405563,18405734-184059... 29 1.5
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 29 2.6
06_01_1107 + 9120664-9120793,9120882-9121615,9121694-9123069,912... 28 3.4
04_01_0048 + 522423-522552,522641-523374,523453-524828,528100-52... 28 4.5
01_03_0278 - 14509481-14509506,14510700-14512291,14512547-145126... 28 4.5
11_06_0732 - 26740718-26741704,26741876-26742478 27 5.9
10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505 27 5.9
06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515 27 5.9
05_03_0226 - 10645036-10646001,10646313-10646828,10646905-106472... 27 5.9
05_01_0444 + 3520227-3520398,3520493-3520673,3521465-3521618,352... 27 5.9
05_01_0180 + 1268129-1268237,1268382-1268731,1268903-1269808,127... 27 5.9
09_06_0291 - 22066550-22067610,22067721-22067975,22068093-220682... 27 7.8
08_01_0701 + 6200351-6200470,6200879-6201104,6201502-6201747,620... 27 7.8
06_03_0920 - 25942515-25942772,25944186-25944248,25944358-259444... 27 7.8
03_03_0060 - 14157352-14158851 27 7.8
02_02_0575 + 11710600-11710803 27 7.8
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL YI+W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYIAWVWLNQ 279
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL YI+W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYIAWVWLNQ 279
>06_03_0228 -
18439659-18440900,18441212-18441736,18441813-18442118,
18442290-18442877
Length = 886
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL YI+W+ N+
Sbjct: 239 KAKYFQRANLRHSTKQIKNRFTHLKNYYIAWVWLNQ 274
>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
Length = 504
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL YI+W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYIAWVWLNQ 279
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL YI+W+ N+
Sbjct: 223 KAKYFQRANLRHSTKQIKNRFTHLKNYYIAWVWLNQ 258
>01_07_0227 +
42144437-42144446,42145059-42145428,42145528-42145649,
42145767-42145935,42146236-42146545,42146742-42146825,
42147012-42147083,42147780-42147821,42147931-42148020,
42148106-42148213,42148292-42148384,42148540-42148619,
42148701-42148953,42151222-42151236
Length = 605
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 123 CYIREFDGVLPFDSVTYSKEAECTRYFCAH 212
C I+ + +L + SK A+C RYFC H
Sbjct: 182 CLIKMLEEILERAAEISSKLAQCDRYFCGH 211
>07_03_0457 -
18404577-18405193,18405317-18405563,18405734-18405953,
18406239-18406333
Length = 392
Score = 29.5 bits (63), Expect = 1.5
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y++W+ N+
Sbjct: 148 KAKYFQRANLRHSTKQIKNRFTHLKNYYVAWVWLNQ 183
>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y++W+ N+
Sbjct: 235 KAKYFQRANLRHSTKQIKNRFTHLKNYYMAWVWLNQ 270
>06_01_1107 +
9120664-9120793,9120882-9121615,9121694-9123069,
9123152-9123322,9123402-9123702
Length = 903
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = -1
Query: 319 VQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGRTPS 140
V ++++ S+ K H + +L+S+ H A C RVH V E PS
Sbjct: 438 VDHIEVIVVIQSISNKRHLHIPILNSNFHLMQGAAQCVLLARVHPTFAPEVAEGMAFKPS 497
>04_01_0048 +
522423-522552,522641-523374,523453-524828,528100-528400
Length = 846
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = -1
Query: 319 VQRMQIVSRFSSVLVKVHTGVSVLSSSLHDWCMTASCAQKYRVHSASFEYVTESKGRTPS 140
V ++++ S+ K H + +L+S+ H A C RVH V E PS
Sbjct: 438 VDHIEVIVVIRSISNKRHLHIPILNSNFHLMQGAAQCVLLARVHPTFAPEVAEGMAFKPS 497
>01_03_0278 - 14509481-14509506,14510700-14512291,14512547-14512638,
14513030-14514412
Length = 1030
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 18 SLKTLVFCVCVTLASAAIQRSALEPIPDKFSGLQGCYIRE 137
SL L C C +LAS+++ S P +S LQG I E
Sbjct: 960 SLVKLTLCYCKSLASSSLPNS-----PQAYSSLQGLIIME 994
>11_06_0732 - 26740718-26741704,26741876-26742478
Length = 529
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y +W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYSAWVWLNQ 279
>10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505
Length = 916
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y +W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYSAWVWLNQ 279
>06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515
Length = 916
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y +W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYSAWVWLNQ 279
>05_03_0226 -
10645036-10646001,10646313-10646828,10646905-10647210,
10647382-10647984
Length = 796
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y +W+ N+
Sbjct: 244 KAKYFQRANLRHSTKQIKNRFTHLKNYYSAWVWLNQ 279
>05_01_0444 +
3520227-3520398,3520493-3520673,3521465-3521618,
3522222-3522326,3522415-3522495,3522802-3522889,
3523204-3523286,3524370-3524480,3524681-3524827
Length = 373
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 386 IYIYDKCLKFLPVYLVIVLTRLCSKNADCVTFFFCFGKGTY 264
I+ YD CL+ P IVL + A T CF G++
Sbjct: 310 IWSYDHCLRLYPTPHTIVLGDKSDQKAFKYTGITCFNPGSF 350
>05_01_0180 +
1268129-1268237,1268382-1268731,1268903-1269808,
1270120-1271361
Length = 868
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +1
Query: 301 QSAFFEQSRVKTMTKYTGRNFKHLSYIYISWIVFNR 408
++ +F+++ ++ TK F HL Y +W+ N+
Sbjct: 196 KAKYFQRANLRHSTKQIKNRFTHLKNYYSAWVWLNQ 231
>09_06_0291 -
22066550-22067610,22067721-22067975,22068093-22068207,
22068329-22068381,22068467-22068724,22069110-22069160,
22069577-22069822,22070427-22070652,22070984-22071100
Length = 793
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 404 LNTIHDIYIYDKCLKFLPVYLVIVLTRLCSKNADCVTF--FFCFGKGTYRGVCAQ-LIFT 234
L IH ++ C+K+LPVY V R K F F C + Y+ + + F
Sbjct: 571 LPAIHSTLVF-VCVKYLPVYTVPPDERFLVKRIGPKNFHMFRCVARYGYKDIHKKDDDFE 629
Query: 233 RLVYDSIV 210
++++DS++
Sbjct: 630 KMLFDSLI 637
>08_01_0701 +
6200351-6200470,6200879-6201104,6201502-6201747,
6201818-6201868,6202231-6202491,6202587-6202639,
6202705-6202819,6202985-6203239,6203773-6204827
Length = 793
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 404 LNTIHDIYIYDKCLKFLPVYLVIVLTRLCSKNADCVTF--FFCFGKGTYRGV 255
L IH + ++ C+K+LPVY V R K F F C + Y+ +
Sbjct: 573 LPAIHSVVVF-VCVKYLPVYTVPTEERFIVKRIGPKNFHMFRCVARYGYKDI 623
>06_03_0920 -
25942515-25942772,25944186-25944248,25944358-25944477,
25944628-25944780,25945591-25945692
Length = 231
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 242 IFTRLVYDSIVRAEVSGAFSFLRVCYRIKGKDTIELPDVTAL 117
+F +V D IVR E G F Y ++ KD L V+ +
Sbjct: 6 LFGEVVMDGIVRVEPMGGFDGTATAYYLQCKDCGSLGSVSLI 47
>03_03_0060 - 14157352-14158851
Length = 499
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 123 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTP 263
C++R DGV+P +S T E CT + V SC E+ DTP
Sbjct: 251 CFVRSGDGVVP-ESTTTGMEL-CT--IGGNGGVSVGSCWREIVADTP 293
>02_02_0575 + 11710600-11710803
Length = 67
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 161 IKGKDTIELPDVTALKATKFIRDWLQSRALYRRR 60
+KG D + + D AT+ IRDW + A RR
Sbjct: 19 VKGDDGVGVGDDGVSSATEVIRDWENNMATSLRR 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,122,218
Number of Sequences: 37544
Number of extensions: 226634
Number of successful extensions: 579
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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