Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8m04
         (478 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-3|AAK84595.1|  153|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione S...    29   2.3  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AC006607-5|AAF60371.2|  640|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z50794-6|CAA90659.2|  388|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U21320-3|AAA62532.1|  436|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>AC084153-3|AAK84595.1|  153|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.6 protein.
          Length = 153

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 182 FLRVCYRIKGKDTIELPDVTALKATKFIRDWLQSRALYRRR 60
           F ++ Y+I+ K TIE  DV   +   F   WL SR L R R
Sbjct: 104 FDKLIYQIEKKSTIEKIDVYQCRKCIFHSCWLGSRLLPRAR 144


>Z68879-7|CAA93088.2|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.11 protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 99  DKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTF 275
           +KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 37  EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>AF010241-1|AAB65419.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +3

Query: 99  DKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPVCTF 275
           +KFS L+  +      +L  D   +S+     RY       + Q+ ++EL  D  V TF
Sbjct: 37  EKFSQLKPTFPSGQVPILCIDGAQFSQSTAIARYLARKFGFVGQTAEEELQADEVVDTF 95


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical
           protein F54F11.2 protein.
          Length = 1589

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 105 FSGLQGCYIREFDGVLPFDSVTYSKEA 185
           F+ +  C + E+ G  P D  TY   A
Sbjct: 691 FTNMAQCVVNEYSGFCPLDKATYGSAA 717


>U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical
           protein ZK742.2 protein.
          Length = 594

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 311 NADCVTFFFCFGKGTYRGVCAQLIFTRLVYDSIVRA 204
           NADC  F+    +GT  G   Q I+T+  Y  I +A
Sbjct: 427 NADCHRFWRSADEGTVAGKAQQSIYTQRQYTFIGKA 462


>AC006607-5|AAF60371.2|  640|Caenorhabditis elegans Hypothetical
           protein C09E7.4 protein.
          Length = 640

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
 Frame = +1

Query: 178 RKLNAPDTSARTML--SYTNRVKMS*AQTPLYVPLPKQKKNVTQS-----AFFEQSRVKT 336
           +KL   D      +  ++  +VK +  +TP  +P P+Q+ N  QS       FE S ++ 
Sbjct: 517 KKLGTVDAQQEESILKNFQKQVKSTLYETPTSIPTPEQELNDYQSMPLCWRDFELSPLEF 576

Query: 337 MTKYTGRNFKHLSYI 381
            +KY+ R F  L+ I
Sbjct: 577 WSKYSSR-FPRLTKI 590


>Z50794-6|CAA90659.2|  388|Caenorhabditis elegans Hypothetical
           protein F59F5.5 protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +3

Query: 93  IPDKFSGLQGCYIREFDGVLPFDSVTYSKEAECTRYFC 206
           I  K   L  CY     G  PF    + K + C  ++C
Sbjct: 204 IERKHENLHYCYALMHKGYKPFGQEVFKKSSTCEGHYC 241


>U21320-3|AAA62532.1|  436|Caenorhabditis elegans Hypothetical
           protein K04G7.4a protein.
          Length = 436

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 254 RHPCMYLYQNRRKT*HNLHSLNKAVLK 334
           +H    LY N R T H LH + K VLK
Sbjct: 343 KHEVGELYTNPRDTGHFLHVMRKEVLK 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,853,551
Number of Sequences: 27780
Number of extensions: 208793
Number of successful extensions: 590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)