Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l22
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.7  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 430 CMWLSQDSEKLYAGCGDNNVYVFNLEDGSLISTYKGHNNFIH 555
           C   S D+  L++ CG  + Y+F +    + S  +G N+ ++
Sbjct: 260 CRLFSIDNALLFSICGAASSYLFIMLQLDIGSKTQGTNSTLY 301


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 345 GCCFC*IIKTCMEHKDSFPNFFGLQRC 425
           G   C I +  + H +S PN    Q+C
Sbjct: 178 GATLCSIPQMVVFHVESHPNITWYQQC 204


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 345 GCCFC*IIKTCMEHKDSFPNFFGLQRC 425
           G   C I +  + H +S PN    Q+C
Sbjct: 178 GATLCSIPQMVVFHVESHPNITWYQQC 204


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 380 HTGFDNLTETTAFQSHPHISLTVPIIRNF 294
           H GF N+T TT     P ++     +++F
Sbjct: 447 HYGFHNVTNTTLQNLTPQLNYISMKLQSF 475


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,724
Number of Sequences: 336
Number of extensions: 3248
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)