BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8l20
(577 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY062196-1|AAL58557.1| 151|Anopheles gambiae cytochrome P450 CY... 24 4.1
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 7.1
>AY062196-1|AAL58557.1| 151|Anopheles gambiae cytochrome P450
CYP4D17 protein.
Length = 151
Score = 23.8 bits (49), Expect = 4.1
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -2
Query: 186 QVSQYLNGQVLRTGRNNQKQAYL*SKLSKYAPEHQKF 76
Q + +NG+++ G N + + ++Y PE +KF
Sbjct: 83 QQTAEINGKIIPAGANLIIMPFFLGREARYFPEPEKF 119
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 23.0 bits (47), Expect = 7.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 262 QDLALIWLNLLSSTMNMRNRYLHPLVLFKWKLS-QNLRRQ 378
+DL I + ++TM R RY F W L + LR++
Sbjct: 248 EDLMRILVTACNATMTKRKRYTPNKSAFWWTLEIEALRKE 287
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,650
Number of Sequences: 2352
Number of extensions: 9355
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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