Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l14
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    29   0.10 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   3.8  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    24   5.1  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    23   6.7  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   6.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.9  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 29.5 bits (63), Expect = 0.10
 Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
 Frame = +3

Query: 222 TTKDVKYSAANLNAFLQRVMPGMLEQLDENK----ENAYESSESDEDNEILTAKLVQELK 389
           T KD++   A L   L+  +P    +L+  K    ENA E  E  +    +  KL + + 
Sbjct: 518 TEKDLEEKRARLQT-LEEALPVTRTELETAKQKLQENANEERELTQTLRAVQGKLQESMA 576

Query: 390 VREVQGSGDQALSVLDLSWSNTGNSLAVSLGQKQHENWCTDNGLIRFYTVKVSAGDKLVH 569
             +   S  + L  L +   N G    + LG+  +         +   T   +    +V 
Sbjct: 577 AMQSTRSQGKVLDAL-MRQKNEGRIPGI-LGRLGNLGGIDARYDVAISTCCGTLDHIVVE 634

Query: 570 SMDINEKNCVSVLKYHPSGRGS-VRLR--DGYGRNC 668
           ++D   K C+  LK H  GR S + L     Y RNC
Sbjct: 635 TID-TAKACIEFLKQHDIGRASFIALEKIQQYERNC 669


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = -3

Query: 245 RIFYVFCRQILCRRGHR-*TVFVSNSLSCDGRFKEFCSLSAGAR 117
           RI Y FCR + C+   +    F +     D R K+   L A  R
Sbjct: 436 RILYCFCRNVECKELEKSYHTFGAQIADVDERIKQLDGLLASVR 479


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +3

Query: 294 EQLDENKENAYESSESDEDNE 356
           E+ +E++E+ YE  +++ED E
Sbjct: 481 EEDEEDEEDEYEGDDTEEDEE 501


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 237 LRLLSSNPL*ERSSMNRLCKQQFELRRPLQRI 142
           LR   ++PL    + N L ++ FE R P QR+
Sbjct: 99  LRFGRNDPLWTSFNENALLEENFEKRAPSQRL 130


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 604 TETQFFSLISM-LCTNLSPALTLTV*NLIKPLSVHQFSC 491
           T+  F ++++   C  L+P  + T+ N + PL++  + C
Sbjct: 150 TKPPFLNVVAKSTCIALTPTGSWTLRNCLNPLNIFPYIC 188


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 90  SVAVKKTEDASTGTQTTEFFEAAVATQTVAYKDGSSMT---SPTEDLTTKD 233
           SVA   T +AST T+     + A  T+     + ++ T   + TE+ TT +
Sbjct: 127 SVASPTTAEASTTTEAATTTQEATTTEEATTTEEATTTEKATTTEEATTTE 177


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 557  QISAQHGYQREKLCFSIEISSVGSRLC 637
            Q+ + HG+ R+ LC +   SS   +LC
Sbjct: 981  QVLSGHGFFRDYLCHNGFTSSPDCQLC 1007


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,370
Number of Sequences: 2352
Number of extensions: 12592
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)