Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l11
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.3  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 616 LPILVVVIILSMIQIQQQNCDSYTKCEISALLDHFA 509
           L  L +++ILS I        +Y K  +S L+D  A
Sbjct: 31  LTTLTLLVILSSIDRPYLKSYTYIKLVVSVLMDFIA 66


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 409 GLHFHFPWIE 438
           GLHFH  W++
Sbjct: 413 GLHFHASWLK 422


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 409 GLHFHFPWIE 438
           GLHFH  W++
Sbjct: 420 GLHFHASWLK 429


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 620 FSSYPRCCYYIIDDTNSTT 564
           +S+   C YY +DD +  T
Sbjct: 109 YSNVTTCSYYSLDDLSEDT 127


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 258 CKLAWIGDVCVTEM 299
           C + W G VC  EM
Sbjct: 125 CGVGWTGKVCDVEM 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,741
Number of Sequences: 336
Number of extensions: 2545
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)