BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8l10
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83844-6|CAB63039.1| 213|Homo sapiens protein ( S domain contai... 40 0.007
CR456463-1|CAG30349.1| 213|Homo sapiens dJ37E16.7 protein. 40 0.007
BC002808-1|AAH02808.1| 213|Homo sapiens NOL12 protein protein. 40 0.007
AL160132-1|CAB77148.1| 213|Homo sapiens hypothetical protein pr... 40 0.007
>Z83844-6|CAB63039.1| 213|Homo sapiens protein ( S domain
containing protein ).).
Length = 213
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 462 LVFDEAKRKDFLCGFRKRKLERKKKA 539
L FDE KR+++L GF KRK+ERKK A
Sbjct: 20 LSFDEEKRREYLTGFHKRKVERKKAA 45
>CR456463-1|CAG30349.1| 213|Homo sapiens dJ37E16.7 protein.
Length = 213
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 462 LVFDEAKRKDFLCGFRKRKLERKKKA 539
L FDE KR+++L GF KRK+ERKK A
Sbjct: 20 LSFDEEKRREYLTGFHKRKVERKKAA 45
>BC002808-1|AAH02808.1| 213|Homo sapiens NOL12 protein protein.
Length = 213
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 462 LVFDEAKRKDFLCGFRKRKLERKKKA 539
L FDE KR+++L GF KRK+ERKK A
Sbjct: 20 LSFDEEKRREYLTGFHKRKVERKKAA 45
>AL160132-1|CAB77148.1| 213|Homo sapiens hypothetical protein
protein.
Length = 213
Score = 39.9 bits (89), Expect = 0.007
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 462 LVFDEAKRKDFLCGFRKRKLERKKKA 539
L FDE KR+++L GF KRK+ERKK A
Sbjct: 20 LSFDEEKRREYLTGFHKRKVERKKAA 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,854,591
Number of Sequences: 237096
Number of extensions: 976417
Number of successful extensions: 1052
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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