Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l10
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095185-1|AAM12278.1|  264|Drosophila melanogaster LD10447p pro...    37   0.025
AE014296-1004|AAN12112.1|  264|Drosophila melanogaster CG32418-P...    37   0.025
AY069719-1|AAL39864.1| 1136|Drosophila melanogaster LP02352p pro...    29   3.8  
AE014297-3136|AAF55981.2| 1136|Drosophila melanogaster CG18596-P...    29   3.8  

>AY095185-1|AAM12278.1|  264|Drosophila melanogaster LD10447p
           protein.
          Length = 264

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 462 LVFDEAKRKDFLCGFRKRKLERKKKA 539
           +VFD  KR +FL GFRKRK ER+ +A
Sbjct: 13  VVFDNKKRIEFLSGFRKRKNERRSRA 38


>AE014296-1004|AAN12112.1|  264|Drosophila melanogaster CG32418-PA
           protein.
          Length = 264

 Score = 36.7 bits (81), Expect = 0.025
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 462 LVFDEAKRKDFLCGFRKRKLERKKKA 539
           +VFD  KR +FL GFRKRK ER+ +A
Sbjct: 13  VVFDNKKRIEFLSGFRKRKNERRSRA 38


>AY069719-1|AAL39864.1| 1136|Drosophila melanogaster LP02352p
           protein.
          Length = 1136

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +1

Query: 13  IQNPINFGNNI-YILFSLLKKCENNSSRRYII*VYLFF*PINL*SSHISIAKRYRN 177
           +QNP+  G  I Y++FSL    ++ S   Y++ +   +  I+   SH  +A++ RN
Sbjct: 372 LQNPVLRGEAINYVIFSLSATIDSLSLGDYLLFMESLYNTIDRYQSHSQLAQKIRN 427


>AE014297-3136|AAF55981.2| 1136|Drosophila melanogaster CG18596-PA
           protein.
          Length = 1136

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +1

Query: 13  IQNPINFGNNI-YILFSLLKKCENNSSRRYII*VYLFF*PINL*SSHISIAKRYRN 177
           +QNP+  G  I Y++FSL    ++ S   Y++ +   +  I+   SH  +A++ RN
Sbjct: 372 LQNPVLRGEAINYVIFSLSATIDSLSLGDYLLFMESLYNTIDRYQSHSQLAQKIRN 427


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,236,689
Number of Sequences: 53049
Number of extensions: 305666
Number of successful extensions: 458
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)