Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l09
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.34 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.44 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.1  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 315 NCQVAIKIISKFQAPGDYLKKFLP 386
           +C   IK   K    GDY++K+LP
Sbjct: 424 HCYCPIKFGRKADPNGDYIRKYLP 447


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 405 KGLKHENLIRFLQAIETTHRVY 470
           +GLK +N ++FL+AIE   R +
Sbjct: 152 EGLKRQNPVKFLRAIEEYGRFF 173


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 426 LIRFLQAIETTHRVYIVM 479
           +IRFLQA+ T    Y+++
Sbjct: 121 IIRFLQAVVTYSSTYVLV 138


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 422 KLNTFSSSNRNHT*GLHSNGIRREREPVRHYTKRS 526
           K      SN NH   L     + E E   HY+K +
Sbjct: 316 KETNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNT 350


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 422 KLNTFSSSNRNHT*GLHSNGIRREREPVRHYTKRS 526
           K      SN NH   L     + E E   HY+K +
Sbjct: 208 KETNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNT 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,949
Number of Sequences: 336
Number of extensions: 2563
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)