Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l08
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.7  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 328 RQRRGPTDYITNAAEMFC 275
           ++R GPT    NA  +FC
Sbjct: 295 KERNGPTQTTLNATTLFC 312


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 328 RQRRGPTDYITNAAEMFC 275
           ++R GPT    NA  +FC
Sbjct: 385 KERNGPTQTTLNATTLFC 402


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 231  TMYSKLTSWFFSTSKKRFAENFDI--VTNLQPLDKCPIRLIT 112
            T  + ++ W  S    R+AE+F+   VT L+   +  ++ +T
Sbjct: 922  TQLTSVSEWLASIKMSRYAESFERSGVTTLEAAARVTVQELT 963


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 2   SESNEEIRFILKFYYKKGL 58
           S+  EE++ I+KF+  KG+
Sbjct: 206 SDVREEMKNIMKFWLDKGI 224


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 146 SLWTNAPLDLSRG 108
           + WT + +DLSRG
Sbjct: 450 TFWTKSDVDLSRG 462


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
          protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 14 EEIRFILKFYYKKG 55
          E  R IL FY++KG
Sbjct: 6  EHYRHILLFYFRKG 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,851
Number of Sequences: 438
Number of extensions: 3782
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)