Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8l06
(507 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces pom... 37 0.002
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 27 2.1
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 26 2.8
SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 3.7
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 25 6.5
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 6.5
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 25 8.6
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 8.6
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 25 8.6
>SPCC576.04 |||bax inhibitor-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 266
Score = 37.1 bits (82), Expect = 0.002
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Frame = +1
Query: 16 LVLAVIGMSTIVSFITVHYNTEILMYAMLAT-AVVVFVCILLACSNFDFTKW--FIYVIV 186
L A+ G+ T+ + IT ++ I++ A+ T V V + S +DF++ F+YV +
Sbjct: 127 LFTALEGL-TLGTAITF-FSARIILEAVFITLGVFVALTAFTFQSKWDFSRLGGFLYVSL 184
Query: 187 ISTAFSVIVMIIGVTTLITNTHMKSLDLGLLIVGTLINVVILVLELQTILGGRSVELHED 366
S + ++ +T +D+ GTL+ ++ + IL S E
Sbjct: 185 WSLILTPLIFFFVPSTPF-------IDMAFAGFGTLVFCGYILFDTYNILHRYSPE---- 233
Query: 367 DYAMGAFLLYISIVDIFLQFVQILGIL 447
++ M + +LY+ +++F++ +QILG+L
Sbjct: 234 EFIMSSLMLYLDFINLFIRILQILGML 260
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 2.1
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 100 LATAVVVFVCILLACSNFDFTKW---FIYVIVISTAFSVIVMIIGVTTLITNTHMKSLD- 267
+ATA++V LL C F K+ F ++ ++ ++++++G++ ++ + +
Sbjct: 262 IATALIVVFLHLLPCERTSFKKFLKTFDFIGLVCVITGIVLILLGISLGASSGKWRRANI 321
Query: 268 LGLLIVGTLINVVILVLELQT 330
L LI+G + V + + T
Sbjct: 322 LCYLIIGGCLFVFAFIYDTFT 342
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 26.2 bits (55), Expect = 2.8
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +1
Query: 196 AFSVIVMIIGVTTLITNTHMKSLDLGLLIVGTLINVVILVLEL 324
A + I++I+G +T H+ + +G ++G + + L++ L
Sbjct: 161 AIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPL 203
>SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 128
Score = 25.8 bits (54), Expect = 3.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 340 GRSVELHEDDYAMGAFLLYISIVDIFLQFV 429
G V + ++ Y + LLYISI+ +FL +V
Sbjct: 17 GECVRVAKEKYKIIHRLLYISIIFLFLNYV 46
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 6.5
Identities = 9/50 (18%), Positives = 22/50 (44%)
Frame = +1
Query: 91 YAMLATAVVVFVCILLACSNFDFTKWFIYVIVISTAFSVIVMIIGVTTLI 240
Y M +++++FV + W + I + + V++M+ T +
Sbjct: 153 YTMCRSSILIFVFFFSVIFRIEMFDWILLCITLVISAGVVLMVATETQFV 202
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 345 STT*NGLKLQYQYNNIYQCADN 280
+T N K+ +QYNNI ADN
Sbjct: 742 NTDINVYKIHFQYNNISGLADN 763
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 24.6 bits (51), Expect = 8.6
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 388 GMHPSRNRPRGVPQIYHLEWSE 323
G++P R G+P I+ WS+
Sbjct: 164 GLYPESKRKMGLPVIFTRNWSD 185
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -1
Query: 186 DNYVYEPFSEVKIGTGQ*YTDKHNDSGRQHCIHQDLRVVMHRDERNNCGHSYNR 25
D Y Y +SE K + + D +N++ R+H + + R + SY+R
Sbjct: 189 DYYDYPRYSERKSLNSKRHVDNYNENRRRH--YDSYSSYDELERRRSSNESYSR 240
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 24.6 bits (51), Expect = 8.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 372 RDGCIPTLHFHSRYIPPIRADIGYF 446
+ CIP FH Y+P D YF
Sbjct: 423 QQACIPYDGFHKHYLPGTAIDWVYF 447
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,229,662
Number of Sequences: 5004
Number of extensions: 47833
Number of successful extensions: 112
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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