Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8l05
         (578 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VHQ8 Cluster: CG31369-PA; n=8; Endopterygota|Rep: CG3...    34   2.1  
UniRef50_A4A726 Cluster: Transcriptional regulator, TetR family ...    33   4.9  
UniRef50_Q54JH0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q9VZU1 Cluster: CG14962-PA; n=1; Drosophila melanogaste...    32   8.5  

>UniRef50_Q9VHQ8 Cluster: CG31369-PA; n=8; Endopterygota|Rep:
           CG31369-PA - Drosophila melanogaster (Fruit fly)
          Length = 713

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +3

Query: 381 GSPANVLHETTLHSRSASRNLTAEVSLLVSRVKSGQNLAYQWADARCEWGAGVCRLQ 551
           G+P  +    +LH+ S  R   A ++++V      Q +A++W   R E G+G+ R +
Sbjct: 446 GAPQVLRLHPSLHTVSVKRGEAASLTMVVCADPRPQRVAWEWGSLRLEAGSGIDRFR 502


>UniRef50_A4A726 Cluster: Transcriptional regulator, TetR family
           protein; n=1; Congregibacter litoralis KT71|Rep:
           Transcriptional regulator, TetR family protein -
           Congregibacter litoralis KT71
          Length = 213

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +3

Query: 288 LYGDLLLQHHTESHDAAQKCSQADCLPPMRAGSPANVLHETTLHSRSASRNLTAEVSLLV 467
           LYG++L     E      +  + +C P  R     + LH+ + H+R  +R L  E+  + 
Sbjct: 67  LYGEVLTSIAKELETIVSQSQKTECAPEARLAQIFDALHQPSAHARLRTRLLVRELMDVG 126

Query: 468 SR 473
           SR
Sbjct: 127 SR 128


>UniRef50_Q54JH0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 355

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 261 ADRAVGCLALYGDLLLQHHTESHDAAQKCSQADCLPPMRAGSPANV 398
           +D  VGCL    +  ++   E   +  KC  + CLP  RAG PANV
Sbjct: 127 SDGDVGCLHTPIENCIECEGEGCISNDKCLPSLCLPYSRAGGPANV 172


>UniRef50_Q9VZU1 Cluster: CG14962-PA; n=1; Drosophila
           melanogaster|Rep: CG14962-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 388

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 264 DRAVGCLALYGDLLLQHHTESHDAAQ-KCSQADCLPPMRAG 383
           D+   CLA  G  LLQHH E H  ++ KC   +     +AG
Sbjct: 93  DKNYKCLACGGKFLLQHHLEKHQCSKHKCPVCELTYNSKAG 133


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,088,121
Number of Sequences: 1657284
Number of extensions: 9629406
Number of successful extensions: 27882
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27826
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)